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@GSEA-MSigDB

GSEA-MSigDB

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  1. gsea-desktop gsea-desktop Public

    Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological…

    Java 36 13

  2. gsea-gpmodule gsea-gpmodule Public

    A GenePattern module for running the GSEA method

    Shell 1 2

  3. gseapreranked-gpmodule gseapreranked-gpmodule Public

    A GenePattern module for running the GSEA Preranked method

    Shell 1

  4. msigdb-xml-browser msigdb-xml-browser Public

    The MSigDB XML Browser is a free utility for exploring the MSigDB XML file.

    Java

  5. ssGSEA-gpmodule ssGSEA-gpmodule Public

    A GenePattern module for running the ssGSEA method

    R 12 7

  6. GSEA_R GSEA_R Public

    Updated implementation of the GSEA-P R application for modern R distributions

    R 94 36

Repositories

Showing 10 of 14 repositories
  • CLSGCTGMT.jl Public

    Read .cls, .gct, and .gmt 💾

    GSEA-MSigDB/CLSGCTGMT.jl’s past year of commit activity
    OpenEdge ABL 1 0 0 0 Updated Oct 4, 2024
  • GSEA2.jl Public

    Julia implementation of the next generation GSEA 🏔️

    GSEA-MSigDB/GSEA2.jl’s past year of commit activity
    Julia 21 2 5 0 Updated Aug 26, 2024
  • gsea2-gpmodule Public

    GenePattern Module wrapper for the next generation GSEA

    GSEA-MSigDB/gsea2-gpmodule’s past year of commit activity
    Python 0 0 0 0 Updated Aug 21, 2024
  • ensembl-genes Public Forked from related-sciences/ensembl-genes

    Extract the Ensembl genes catalog to simple tables

    GSEA-MSigDB/ensembl-genes’s past year of commit activity
    Python 0 5 0 0 Updated May 13, 2024
  • gsea-desktop Public

    Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes).

    GSEA-MSigDB/gsea-desktop’s past year of commit activity
    Java 36 13 28 0 Updated Apr 6, 2024
  • collapsedataset-gpmodule Public

    A GenePattern module for running GSEA's CollapseDataset utility

    GSEA-MSigDB/collapsedataset-gpmodule’s past year of commit activity
    Shell 0 1 0 0 Updated Dec 20, 2022
  • gsea-gpmodule Public

    A GenePattern module for running the GSEA method

    GSEA-MSigDB/gsea-gpmodule’s past year of commit activity
    Shell 1 2 0 0 Updated Dec 20, 2022
  • gseapreranked-gpmodule Public

    A GenePattern module for running the GSEA Preranked method

    GSEA-MSigDB/gseapreranked-gpmodule’s past year of commit activity
    Shell 0 1 0 0 Updated Dec 20, 2022
  • ssGSEA-gpmodule Public

    A GenePattern module for running the ssGSEA method

    GSEA-MSigDB/ssGSEA-gpmodule’s past year of commit activity
    R 12 7 0 0 Updated Dec 20, 2022
  • gsea-leadingedgereport-gpmodule Public

    A GenePattern module for running GSEA's LeadingEdge report creator

    GSEA-MSigDB/gsea-leadingedgereport-gpmodule’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 3, 2022
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Most used topics

bioinformatics gsea