plugins are a loading

GMOD · Mar 14, 2016 · c4f346b · c4f346b
1 parent 5e75639
commit c4f346b
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Showing 2 changed files with 42 additions and 1 deletion.
diff --git a/grails-app/conf/Config.groovy b/grails-app/conf/Config.groovy
@@ -344,3 +344,38 @@ auditLog {
     logIds = true  // log db-ids of associated objects.
 
 }
+
+jbrowse {
+    git {
+        url= "https://github.com/GMOD/jbrowse"
+        version= "master"
+    }
+    plugins {
+        WebApollo{
+            included = true
+        }
+        NeatHTMLFeatures{
+            included = true
+        }
+        NeatCanvasFeatures{
+            included = true
+        }
+        RegexSequenceSearch{
+            included = true
+        }
+        HideTrackLabels{
+            included = true
+        }
+//        MyVariantInfo {
+//            git = 'https://github.org/GMOD/myvariantinfo'
+//            branch = 'master'
+//            alwaysRecheck = "true"
+//            alwaysPull = "false"
+//        }
+//        SashimiPlot {
+//            git = 'https://github.org/cmdcolin/sashimiplot'
+//            branch = 'master'
+//            alwaysPull = "true"
+//        }
+    }
+}
diff --git a/grails-app/controllers/org/bbop/apollo/JbrowseController.groovy b/grails-app/controllers/org/bbop/apollo/JbrowseController.groovy
@@ -341,10 +341,16 @@ class JbrowseController {
         def plugins = grailsApplication.config.jbrowse?.plugins
         // not sure if I do it this way or via the include
         if(plugins){
+            if(!jsonObject.plugins){
+                jsonObject.plugins = new JSONArray()
+            }
             for(plugin in plugins){
                 JSONObject pluginObject = new JSONObject()
-
+                pluginObject.name = plugin.key
+                pluginObject.location = "./plugins/${plugin.key}"
+                pluginObject.putAll(plugin.value)
                 jsonObject.plugins.add(pluginObject)
+                log.info "Loading plugin: ${pluginObject.name} details: ${pluginObject as JSON}"
             }
         }