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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 40 23

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 230 65

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 467 198

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 131 85

Repositories

Showing 10 of 103 repositories
  • Apollo3 Public

    JBrowse 2 plugin for editing annotations on an Apollo server

    GMOD/Apollo3’s past year of commit activity
    TypeScript 10 Apache-2.0 4 61 7 Updated Mar 20, 2025
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components’s past year of commit activity
    TypeScript 230 Apache-2.0 65 262 (3 issues need help) 20 Updated Mar 19, 2025
  • jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    GMOD/jbrowse’s past year of commit activity
    JavaScript 467 198 159 (18 issues need help) 11 Updated Mar 19, 2025
  • ucsc-hub-js Public

    read and write UCSC track and assembly hub files in node or the browser

    GMOD/ucsc-hub-js’s past year of commit activity
    TypeScript 5 MIT 2 5 1 Updated Mar 19, 2025
  • tabix-js Public

    Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser

    GMOD/tabix-js’s past year of commit activity
    TypeScript 14 MIT 5 2 0 Updated Mar 18, 2025
  • bbi-js Public

    Parser for bigwig and bigbed files

    GMOD/bbi-js’s past year of commit activity
    TypeScript 8 MIT 6 8 1 Updated Mar 18, 2025
  • Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    GMOD/Apollo’s past year of commit activity
    Groovy 131 85 237 (5 issues need help) 2 Updated Mar 17, 2025
  • react-msaview Public

    A multiple sequence alignment viewer

    GMOD/react-msaview’s past year of commit activity
    TypeScript 20 MIT 1 25 0 Updated Mar 17, 2025
  • bam-js Public

    Parse BAM and BAM index files in javascript for node and the browser

    GMOD/bam-js’s past year of commit activity
    TypeScript 22 MIT 9 9 2 Updated Mar 15, 2025
  • jbrowse-react-linear-genome-view-vite-demo Public
    GMOD/jbrowse-react-linear-genome-view-vite-demo’s past year of commit activity
    TypeScript 0 1 0 0 Updated Mar 14, 2025
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