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fix small bug in the dmoc_t routine, after i changed the order of in… #155

fix small bug in the dmoc_t routine, after i changed the order of in…

fix small bug in the dmoc_t routine, after i changed the order of in… #155

name: Run Tripyview Test
# Trigger the workflow on push and pull request for all branches
on:
push: # Trigger on push to any branch
branches:
- '**'
pull_request: # Trigger on pull request to any branch
branches:
- '**'
# Ensures that if multiple runs of the same workflow are triggered, the
# in-progress run is canceled before starting a new one.
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
setup:
name: ${{matrix.os}}-py-${{matrix.python-version}}
runs-on: ${{ matrix.os }} #, macos-latest, windows-latest]
#___________________________________________________________________________
# The job will run across multiple platforms and Python versions:
# Operating Systems: ubuntu-latest, macos-latest, and windows-latest
# Python Versions: 3.8, 3.9, and 3.10
# This creates a matrix of environments to test against different configurations.
strategy:
#max-parallel: 1
fail-fast: false
matrix:
os: ["ubuntu-latest"]
#os: ["ubuntu-latest", "macos-latest", "windows-latest"]
#python-version: ["3.9"]
python-version: ["3.9", "3.10", "3.11", "3.12"]
#___________________________________________________________________________
# The defaults: run: shell: bash -l {0} block in your GitHub Actions workflow
# specifies the default shell that will be used to run commands in the run
# steps of the job. Here's a breakdown of what this line does:
# shell: bash -l {0}:
# This sets the shell to be used as bash in login mode (-l).
# {0} is a placeholder for the actual command that will be run in
# {that shell. GitHub Actions replaces {0} with the actual command
# {when it runs a run: step.
defaults:
run:
shell: bash -l {0}
#___________________________________________________________________________
steps:
#_______________________________________________________________________
# Checkout the Main Repository - The action first checks out the
# repository to a directory named main so that the workflow can operate
# on the repository code.
- name: checkout main
uses: actions/checkout@v3
with:
path: main
#_______________________________________________________________________
# Checkout pyfesom2 Repository - It then checks out the tripyview
# repository, which is stored in the path: pyfesom2 directory. This is
# likely a dependency or another repository being tested.
- name: checkout tripyview
uses: actions/checkout@v3
with:
repository: FESOM/tripyview
path: tripyview
fetch-depth: 0
#_______________________________________________________________________
# Install Conda Environment with Micromamba - Uses Micromamba (a lighter,
# faster version of Conda) to set up the Python environment from a YAML
# file (requirements-py37.yml) stored in the main/ci/ directory.
# It caches the environment to speed up future runs.
- uses: mamba-org/setup-micromamba@main
with:
environment-name: tripyview
create-args: >-
python=${{ matrix.python-version }}
xarray
netCDF4
# supports off, critical, error, warning, info, debug, trace
log-level: info
cache-environment: true
cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{env.PYTHON_VERSION}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
#_______________________________________________________________________
# Check xarray and netCDF Versions - This step prints the versions of two
# key libraries (xarray and netCDF4) used by the project to ensure they
# are installed correctly.
- name: checkout xarray version
working-directory: tripyview
run: |
python -c "import xarray; print('xarray version:', xarray.__version__)"
python -c "import netCDF4; print('netcdf4 (py,c) versions:', netCDF4.__version__, netCDF4._netCDF4.__netcdf4libversion__)"
#_______________________________________________________________________
# Install tripyview - Installs the tripyview library in editable mode (-e),
# allowing changes in the source code to immediately affect the library
# without reinstalling.
- name: install tripyview
working-directory: tripyview
run: |
python -m pip install -e .
#_______________________________________________________________________
# Test tripyvie Import - Tests whether the pyfesom2 package can be
# successfully imported, which is a basic check to ensure the installation
# is correct.
- name: checkout tripyview import
working-directory: tripyview
run: |
python -c "import tripyview"