Create Hosp Only Model from cdcgov/wastewater-informed-covid-forecasting #865

	name: pipeline

	on:
	pull_request:
	push:
	branches: [main]

	jobs:
	install-and-test:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: "3.12"
	- name: cache poetry
	uses: actions/cache@v4
	with:
	path: ~/.local
	key: ${{ runner.os }}-poetry
	- name: install poetry
	run: pip install poetry

	- name: install package
	run: poetry install --with dev

	- name: install pytest-cov
	run: poetry run pip install pytest-cov

	- name: run tests
	run: poetry run pytest pipeline --cov=pipeline --cov-report term --cov-report xml
	- name: Upload coverage to Codecov
	uses: codecov/codecov-action@v4
	with:
	env_vars: OS,PYTHON
	fail_ci_if_error: true
	flags: unittests
	file: coverage.xml
	plugin: pycoverage
	token: ${{ secrets.CODECOV_TOKEN }}
	verbose: true

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