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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 14

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    32 38

Repositories

Showing 10 of 382 repositories
  • phdi Public
    CDCgov/phdi’s past year of commit activity
    HTML 33 CC0-1.0 14 213 11 Updated Sep 25, 2024
  • prime-reportstream Public

    ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

    CDCgov/prime-reportstream’s past year of commit activity
    Kotlin 70 CC0-1.0 39 1,309 99 Updated Sep 25, 2024
  • CDCgov/reportstream-sftp-ingestion’s past year of commit activity
    Go 5 Apache-2.0 0 0 0 Updated Sep 25, 2024
  • CDCgov/cfa-abc-calibration’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Sep 25, 2024
  • NEDSS-DataIngestion Public

    Data Ingestion for Modernization of NEDSS Project by Enquizit

    CDCgov/NEDSS-DataIngestion’s past year of commit activity
    Java 6 Apache-2.0 2 0 5 Updated Sep 25, 2024
  • PyRenew Public

    Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.

    CDCgov/PyRenew’s past year of commit activity
    Python 14 Apache-2.0 2 43 3 Updated Sep 25, 2024
  • phoenix Public

    🔥🐦🔥PHoeNIx: A short-read pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 54 Apache-2.0 19 9 2 Updated Sep 25, 2024
  • CDCgov/RecordLinker’s past year of commit activity
    Python 1 Apache-2.0 0 12 3 Updated Sep 25, 2024
  • CDCgov/data-exchange-processing-status’s past year of commit activity
    Kotlin 1 Apache-2.0 0 1 5 Updated Sep 24, 2024
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 6 2 0 0 Updated Sep 24, 2024