ASPEN 1.0.2

• Set the singularity cache dir if --singcache is not provided. (#37, @kelly-sovacool)
• ASPEN now has a documentation website: https://ccbr.github.io/ASPEN

v1.0.1

• documentation updated
• differential ATAC working

v0.6.1

• correction to fqscreen cattle path

v0.6

• support for mmul10 (Macaca) and bosTau9 (cattle) genomes
  • created resource files: indexes, promoter files, tss files etc.
• Added Macaca and Cattle to fastqscreen indexes
• support increased from 4 replicate to 6 replicates
• macs and genrich fixed width peaks generation rule added
• docker updated to v10 (genome support and tidyverse added)

v0.5.3

Includes reference files for mmul10

v0.5.2

• atac_assign_multimappers.py now getting query sorted input
• dryrun log saved in workdir
• local (workdir) scriptsdir used

v0.5.1

v0.5.1

• typo fix in main wrapper script

v0.5

• fastqscreen added
• minor bug fixes

v0.4.1

• Bug fixes
• minor updates

v0.4

• Multiqc edits
• README updates