Merge pull request #24 from matthdsm/master

fixed script shebangs for multi env use

scripts/assess_significance.R

@@ -1,3 +1,5 @@
+#!/usr/bin/env Rscript
+
 library(rtracklayer)
 
 args <- commandArgs()

scripts/freec2bed.pl

@@ -1,4 +1,4 @@
-#!/usr/bin/perl -w
+#!/usr/bin/env perl -w
 #translate *_ratio.txt (the out put of FREEC) into a BED track
 
 use strict;

scripts/freec2circos.pl

@@ -1,4 +1,4 @@
-#!/usr/bin/perl -w
+#!/usr/bin/env perl -w
 #translate "*_ratio.txt" (output of FREEC) into a Circos track
 
 use strict;

scripts/get_fasta_lengths.pl

@@ -1,4 +1,4 @@
-#!/usr/bin/perl -w
+#!/usr/bin/env perl -w
 #prints lengths of sequences from a multifasta file
 
 use strict;

scripts/makeGraph.R

@@ -1,3 +1,5 @@
+#!/usr/bin/env Rscript
+
 args <- commandArgs()
 
 dataTable <-read.table(args[5], header=TRUE);

scripts/makeGraph_Chromosome.R

@@ -1,3 +1,5 @@
+#!/usr/bin/env Rscript
+
 args <- commandArgs()
 
 dataTable <-read.table(args[6], header=TRUE);