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88 Open 48 Closed
88 Open 48 Closed
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Issues list

Interpreting the results
#153 opened Oct 15, 2024 by MaryGoAround
Regions missing from ratio file
#152 opened Sep 27, 2024 by BhumikaPriyadarshini
FREEC segfaulting at "annotate copy numbers": cannot create std::vector larger than max_size()
#151 opened Sep 24, 2024 by dmgie
Segmentation fault after samtools or sambamba read the BAM file
#149 opened Aug 15, 2024 by Calhs
2
get the float copy number values
#148 opened Jul 19, 2024 by hushuzuiniu
2
What is the meaning of suclonal information in the _ratio.txt file
#147 opened Jul 18, 2024 by kmavrommatis
1
Understanding _ratio.txt and _BAF.txt for counting informative markers
#146 opened Jul 18, 2024 by kmavrommatis
1
questions about ratio.txt
#145 opened Jul 16, 2024 by ZYongQi
3
error in running gccount
#143 opened Apr 28, 2024 by DeMagicscience
1
Some settings for WGS explaind in manual are not included in provided config file for WGS.
#142 opened Mar 22, 2024 by monagai
missing p values in assess_significance.R
#141 opened Mar 13, 2024 by s-juross
questions about the output
#140 opened Jan 25, 2024 by ZYongQi
7
freec can't extract reads from bam file
#137 opened Dec 13, 2023 by ZYongQi
1
All zero reads with segfault
#135 opened Sep 6, 2023 by dgodin19
1
Somatic cnv issue
#134 opened Aug 9, 2023 by awast
Problem making plots
#133 opened Jul 27, 2023 by Gon1976
2
Error: to calculate BAF values
#130 opened May 25, 2023 by ghost
2
failed to run segmentation on chr*
#129 opened Apr 26, 2023 by ngualand
run with multiple control files
#128 opened Apr 14, 2023 by lmanchon
2
Questions about the output of CNVs and the use of assess_significance
#127 opened Mar 17, 2023 by stbio-hbh
4
Question about the output of freec2bed.pl
#125 opened Mar 7, 2023 by taoziyu97
ERROR : Unable to open fasta file for chr22 (mm10 | WGS)
#124 opened Jan 19, 2023 by Matheo-Lode
4
ERROR: there was a problem in the initial guess of the polynomial
#123 opened Jan 10, 2023 by KamilMaliszArdigen
8
The problem of FREEC_ratio2Absolute.R
#122 opened Dec 30, 2022 by xiasijian
3
running Control-FREEC on multiple tumor/normal paired samples
#121 opened Dec 24, 2022 by awast
3
ProTip! What’s not been updated in a month: updated:<2024-10-11.