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99 Open 146 Closed
99 Open 146 Closed
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Issues list

RegressionModel use_gpu parameters not working question Further information is requested
#392 opened Nov 4, 2024 by Angel030331
4 tasks
3
Singularity container/tutorial compatability enhancement New feature or request
#391 opened Oct 25, 2024 by pear4321
1
Both data are on the same spatial transcriptome slice question Further information is requested
#389 opened Oct 11, 2024 by GLking123
7
How do I set up multi-GPU parallel training? question Further information is requested
#388 opened Oct 10, 2024 by noob000007
2
Reference data: normalized or not question Further information is requested
#386 opened Oct 3, 2024 by Dillon214
1
Compatibility issues with scvi-tools bug Something isn't working
#385 opened Sep 25, 2024 by ori-kron-wis
4
ValueError: Expected parameter loc (Parameter of shape (23, 1)) of distribution Normal(loc: torch.Size([23, 1]), scale: torch.Size([23, 1])) to satisfy the constraint Real(), but found invalid values: question Further information is requested
#384 opened Sep 23, 2024 by chuangzhao0601
2
A question about N_cells_per_location question Further information is requested
#383 opened Sep 13, 2024 by beilouer
1
Inconsistence between N_cells_per_location and the deconvolution result question Further information is requested
#381 opened Sep 6, 2024 by thestarocean
Insight-question: Missing cell types & reliability of conditional expression-profiles question Further information is requested
#380 opened Aug 28, 2024 by floriankreten
Gene imputation question Further information is requested
#379 opened Aug 21, 2024 by wangjiawen2013
1
How to Visualization NMF coloc result? question Further information is requested
#378 opened Aug 14, 2024 by yifanfu01
Estimated cell type counts: adjusted for abundance or not? question Further information is requested
#377 opened Aug 12, 2024 by BaharehAjami
4
Using per-celltype counts for downstream analysis question Further information is requested
#376 opened Jul 30, 2024 by Dillon214
Performance issues on a large (120724) location dataset question Further information is requested
#375 opened Jul 13, 2024 by Dillon214
4
Using scATAC-seq dataset to deconvolute 10x Visium dataset question Further information is requested
#374 opened Jun 27, 2024 by Jadeapple
2
AttributeError: module 'cell2location' has no attribute 'run_c2l' bug Something isn't working
#373 opened Jun 20, 2024 by Lee-jiahao
"OutOfMemoryError: CUDA out of memory." in GPU mode question Further information is requested
#372 opened Jun 20, 2024 by asmlgkj
7
Variable N_cell_per_location Hyperparameter question Further information is requested
#370 opened Jun 11, 2024 by Kwasi-Scientist
How can I use cell2location output for downstream analysis in R Studio question Further information is requested
#369 opened Jun 3, 2024 by 532at
2
How do I find where run_colocation stores its results in adata? question Further information is requested
#368 opened Jun 3, 2024 by singhbhavya
1 of 4 tasks
an unexpected keyword argument 'summ_sc_data_args' bug Something isn't working
#367 opened Jun 3, 2024 by renyuan1988
2
"OutOfMemoryError: CUDA out of memory." in CPU mode? bug Something isn't working
#366 opened May 29, 2024 by Li-ZhiD
1
ELBO loss plot was empty bug Something isn't working
#361 opened May 5, 2024 by Donbbit
1
Regarding memory required for the first tutorial of cell2location question Further information is requested
#360 opened May 3, 2024 by sudeepthi5
2 of 4 tasks
2
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