BayraktarLab cell2location Discussions
Discussions
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You must be logged in to vote Choosing one N_cells_per_location for multiple samples
questionFurther information is requested -
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You must be logged in to vote celltype SC-ST mapping
enhancementNew feature or request -
You must be logged in to vote why w_s,f follow gamma distribution
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You must be logged in to vote Evaluating model like in the first tutorial
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You must be logged in to vote Cell2location reads raw counts as normalized values
questionFurther information is requested FAQ -
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You must be logged in to vote Error running 'Estimate cell-type specific expression of every gene in the spatial data (needed for NCEM)'
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You must be logged in to vote Error running plot in spatial coordinates
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You must be logged in to vote Would the cell type proportion of the reference scRNA-seq dataset affect the performance or results of the deconvolution?
good first issueGood for newcomers questionFurther information is requested -
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