Code

Some training fixes and improvements #65

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Merged

C-Achard merged 25 commits intomainAdaptiveMotorControlLab/CellSeg3D:mainfrom cy/training-fixesAdaptiveMotorControlLab/CellSeg3D:cy/training-fixesCopy head branch name to clipboardApr 22, 2024

+131-57

Commits

Commits on Apr 2, 2024

• Add missing wandb finish for aborted jobs

  C-Achard

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  1f75f24

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• Update utils.py

  C-Achard

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  c73685a

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• Update plugin_model_training.py

  C-Achard

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  ee8f54d

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• Update plugin_model_training.py

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  5329da2

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• Fix num_epochs for aborted training in csv

  C-Achard

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  cc3d086

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• Fix Wnet weight loading

  C-Achard

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  8f853b9

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• Fix reference to WNet weights for transfer learn

  C-Achard

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  af4e016

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• Update plugin_model_training.py

  C-Achard

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  0d2e74a

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• Improved safety for closing previous wandb runs

  C-Achard

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  be62e21

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• Fix rogue Path instead of str

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  97a4b35

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• Update worker_training.py

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  80746ed

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• Change bounds for WNet train parameters

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  7ff2b63

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• Shorten file names in train log

  C-Achard

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  0a585c8

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• More range foor rec loss weight

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  86a8384

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• Update Dice coeff calculation

  C-Achard

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  530b7a3

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• Fix matching len check for csv

  C-Achard

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  3a418b2

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• Update training_wnet.rst

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  8b57657

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• Update WNet docs + typos

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  76218bd

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• Update utils.py

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  de51029

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• Change rec loss weight default

  C-Achard

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  1d13fe5

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• Change discrete output display for WNet training

  C-Achard

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  3507c32

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• Fix incorrect checks for csv saving

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  a933fd0

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• Small improvement to make_csv

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  c22d2a6

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Commits on Apr 13, 2024

• Merge branch 'main' into cy/training-fixes

  C-Achard

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  6c5f740

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Commits on Apr 15, 2024

• Fix logic issue in make_csv

  C-Achard

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  74efbcf

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