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15 Open 10 Closed
15 Open 10 Closed
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Issues list

How do I use call peak with samples with duplicates?
#30 opened Apr 22, 2024 by anyang-kevin
bedtools bam2bed race condition
#29 opened Apr 18, 2024 by skchronicles
1
Keeping low number of PCR duplicates
#28 opened Apr 13, 2024 by phoebe460
Why are species and their chromosomes hardcoded ?
#23 opened Oct 4, 2023 by vidal-adrien
3
Release tag for v1.0.3
#22 opened Jun 27, 2023 by apregier
ValueError: math domain error
#21 opened Feb 1, 2023 by MingLi-929
TypeError: can only concatenate str (not "numpy.int32") to str
#20 opened Jan 31, 2023 by jaudall
How to change the treatment_file-W200-G600-islands-summary file to the standard bed file format?
#19 opened Jan 29, 2023 by danli349
1
IndexError while "Determining the score threshold from random background..."
#18 opened Aug 8, 2022 by arhickman
3
suggestion to raise a warning for genome assembly version difference UCSC/ENSEMBL
#16 opened Jun 9, 2022 by FatihSarigol
Species info for custom genome.
#14 opened Nov 22, 2021 by crowja
4
how to identify differential peaks between cell lines
#12 opened Nov 10, 2021 by pastaxingxin
Not working when chromosome is not starting with "chr"
#10 opened Mar 12, 2021 by PFRoux
2
Write error when specifying output directory
#4 opened Nov 29, 2019 by desireetillo
paired-end?
#2 opened Nov 6, 2019 by freedog8
ProTip! Updated in the last three days: updated:>2024-11-11.