Skip to content

Commit

Permalink
Deploying to gh-pages from @ 05f5f90 🚀
Browse files Browse the repository at this point in the history
  • Loading branch information
yh202109 committed Jul 21, 2024
1 parent 3b5d9e2 commit 5add4e2
Show file tree
Hide file tree
Showing 76 changed files with 1,743 additions and 318 deletions.
4 changes: 2 additions & 2 deletions _downloads/214d05cd65dcc9387b037da1ce5a5c33/report.html

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion _downloads/9911a4d807ac9f1a695f0aa2cf687076/coverage.xml
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
<?xml version="1.0" ?>
<coverage version="7.6.0" timestamp="1721424959183" lines-valid="1494" lines-covered="642" line-rate="0.4297" branches-covered="0" branches-valid="0" branch-rate="0" complexity="0">
<coverage version="7.6.0" timestamp="1721530742706" lines-valid="1494" lines-covered="642" line-rate="0.4297" branches-covered="0" branches-valid="0" branch-rate="0" complexity="0">
<!-- Generated by coverage.py: https://coverage.readthedocs.io/en/7.6.0 -->
<!-- Based on https://raw.githubusercontent.com/cobertura/web/master/htdocs/xml/coverage-04.dtd -->
<sources>
Expand Down
Binary file not shown.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file not shown.
2 changes: 1 addition & 1 deletion _modules/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/health/clinical.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/health/ectd.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/health/emt.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/statlab/corr.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/statlab/kappa.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/stdcdisc/lib.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/stdiso/pdfsummary.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/util/cdt.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/util/cdtg.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
2 changes: 1 addition & 1 deletion _modules/mtbp3/util/lsr.html
Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@
<li class="toctree-l1"><a class="reference internal" href="../../../example_emt4.html">H/ICH/MedDRA/(MLGs by CIOMS)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_pdf.html">Std/ISO/PDF</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_iso_idmp.html">Std/ISO/IDMP</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Basics</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../std_cdisc.html">Std/CDISC/Library</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa.html">StatLab/Cohen’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_kappa2.html">StatLab/Fleiss’s Kappa</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../statlab_corr_tau.html">StatLab/Corr/NP/Kendall’s Tau</a></li>
Expand Down
3 changes: 3 additions & 0 deletions _sources/autoapi/mtbp3/health/clinical/index.rst.txt
Original file line number Diff line number Diff line change
Expand Up @@ -43,6 +43,9 @@ Module Contents



.. py:attribute:: df
.. py:method:: generate_dataset(design=1)
:staticmethod:

Expand Down
12 changes: 12 additions & 0 deletions _sources/autoapi/mtbp3/health/ectd/index.rst.txt
Original file line number Diff line number Diff line change
Expand Up @@ -25,6 +25,18 @@ Module Contents

.. py:class:: ctoc_by_fda(ectd_version='3.2.2', ctoc_version='2.3.3')
.. py:attribute:: ectd_version
.. py:attribute:: ctoc_version
.. py:attribute:: folder_name
.. py:attribute:: ctoc
.. py:method:: __load_list()
Expand Down
74 changes: 74 additions & 0 deletions _sources/autoapi/mtbp3/health/emt/index.rst.txt
Original file line number Diff line number Diff line change
Expand Up @@ -47,6 +47,80 @@ Module Contents
:type: str


.. py:attribute:: version_number
:value: '00.0'



.. py:attribute:: version_number_us
:value: '00_0'



.. py:attribute:: readme_file
:value: None



.. py:attribute:: year
:value: ''



.. py:attribute:: month
:value: ''



.. py:attribute:: language
:value: ''



.. py:attribute:: mdhier
:value: None



.. py:attribute:: llt
:value: None



.. py:attribute:: smq_list
:value: None



.. py:attribute:: smq_content
:value: None



.. py:attribute:: fmq_list
:value: None



.. py:attribute:: fmq_list_unique
:value: None



.. py:attribute:: fmq_list_default
:value: None



.. py:attribute:: meddra_release_file
.. py:attribute:: pattern
.. py:attribute:: files
.. py:method:: expected_file_lists()
Get the three lists of files associated with the Emt.
Expand Down
86 changes: 86 additions & 0 deletions _sources/autoapi/mtbp3/health/index.rst.txt
Original file line number Diff line number Diff line change
Expand Up @@ -29,6 +29,18 @@ Package Contents

.. py:class:: LsrTree(path='', outfmt='list', with_counts=False, count_str='', with_file_label=False, label_str='')
.. py:attribute:: path
.. py:attribute:: outfmt
.. py:attribute:: with_counts
.. py:attribute:: count_str
.. py:method:: list_files()
List files in the specified directory based on the output format.
Expand Down Expand Up @@ -121,6 +133,80 @@ Package Contents
:type: str


.. py:attribute:: version_number
:value: '00.0'



.. py:attribute:: version_number_us
:value: '00_0'



.. py:attribute:: readme_file
:value: None



.. py:attribute:: year
:value: ''



.. py:attribute:: month
:value: ''



.. py:attribute:: language
:value: ''



.. py:attribute:: mdhier
:value: None



.. py:attribute:: llt
:value: None



.. py:attribute:: smq_list
:value: None



.. py:attribute:: smq_content
:value: None



.. py:attribute:: fmq_list
:value: None



.. py:attribute:: fmq_list_unique
:value: None



.. py:attribute:: fmq_list_default
:value: None



.. py:attribute:: meddra_release_file
.. py:attribute:: pattern
.. py:attribute:: files
.. py:method:: expected_file_lists()
Get the three lists of files associated with the Emt.
Expand Down
Loading

0 comments on commit 5add4e2

Please sign in to comment.