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Added nanoSV
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George Carvalho authored Jun 14, 2018
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Expand Up @@ -32,7 +32,8 @@ Relevant studies with Structual Variants and Copy Number Variants in NGS (Genome
* [2017 Evaluation of copy-number variants as modifiers of breast and ovarian cancer risk for BRCA1 pathogenic variant carriers](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5386423/)

## Long read
* [NextSV: a meta-caller for structural variants from low-coverage long-read sequencing data](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-018-2207-1)
* [2017 Mapping and phasing of structural variation in patient genomes using nanopore sequencing](https://www.nature.com/articles/s41467-017-01343-4) - [github](https://github.com/mroosmalen/nanosv)
* [2018 NextSV: a meta-caller for structural variants from low-coverage long-read sequencing data](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-018-2207-1)

## WGS
* [FindSV](https://github.com/J35P312/FindSV): FindSV is a structural variation pipeline written in nextflow and python. FindSV performs variant calling using TIDDIT and CNVnator, and Manta.
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