-
Notifications
You must be signed in to change notification settings - Fork 1
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
1 parent
8bed954
commit cf8559b
Showing
15 changed files
with
1,028 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,29 @@ | ||
name: Build | ||
|
||
on: | ||
push: | ||
release: | ||
types: [published] | ||
|
||
jobs: | ||
unittest: | ||
runs-on: ubuntu-latest | ||
env: | ||
NUMBA_DISABLE_JIT: 1 | ||
steps: | ||
- name: checkout xcube-stac | ||
uses: actions/checkout@v3 | ||
|
||
- name: Set up MicroMamba | ||
uses: mamba-org/provision-with-micromamba@main | ||
with: | ||
cache-env: true | ||
extra-specs: | | ||
python=3.10 | ||
- name: Run unit tests | ||
shell: bash -l {0} | ||
run: | | ||
cd /home/runner/work/xcube-stac/xcube-stac | ||
ls | ||
pytest |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,114 @@ | ||
# Credentials | ||
*-credentials.json | ||
|
||
# Test output data | ||
test-outputs/ | ||
|
||
# IntelliJ / PyCharm | ||
.idea | ||
|
||
# Byte-compiled / optimized / DLL files | ||
__pycache__/ | ||
*.py[cod] | ||
*$py.class | ||
|
||
# C extensions | ||
*.so | ||
|
||
# Distribution / packaging | ||
.Python | ||
build/ | ||
develop-eggs/ | ||
dist/ | ||
downloads/ | ||
eggs/ | ||
.eggs/ | ||
lib/ | ||
lib64/ | ||
parts/ | ||
sdist/ | ||
var/ | ||
wheels/ | ||
*.egg-info/ | ||
.installed.cfg | ||
*.egg | ||
MANIFEST | ||
|
||
# PyInstaller | ||
# Usually these files are written by a python script from a template | ||
# before PyInstaller builds the exe, so as to inject date/other infos into it. | ||
*.manifest | ||
*.spec | ||
|
||
# Installer logs | ||
pip-log.txt | ||
pip-delete-this-directory.txt | ||
|
||
# Unit test / coverage reports | ||
htmlcov/ | ||
.tox/ | ||
.coverage | ||
.coverage.* | ||
.cache | ||
nosetests.xml | ||
coverage.xml | ||
*.cover | ||
.hypothesis/ | ||
.pytest_cache/ | ||
|
||
# Translations | ||
*.mo | ||
*.pot | ||
|
||
# Django stuff: | ||
*.log | ||
local_settings.py | ||
db.sqlite3 | ||
|
||
# Flask stuff: | ||
instance/ | ||
.webassets-cache | ||
|
||
# Scrapy stuff: | ||
.scrapy | ||
|
||
# Sphinx documentation | ||
docs/_build/ | ||
|
||
# PyBuilder | ||
target/ | ||
|
||
# Jupyter Notebook | ||
.ipynb_checkpoints | ||
|
||
# pyenv | ||
.python-version | ||
|
||
# celery beat schedule file | ||
celerybeat-schedule | ||
|
||
# SageMath parsed files | ||
*.sage.py | ||
|
||
# Environments | ||
.env | ||
.venv | ||
env/ | ||
venv/ | ||
ENV/ | ||
env.bak/ | ||
venv.bak/ | ||
|
||
# Spyder project settings | ||
.spyderproject | ||
.spyproject | ||
|
||
# Rope project settings | ||
.ropeproject | ||
|
||
# mkdocs documentation | ||
/site | ||
|
||
# mypy | ||
.mypy_cache/ | ||
.vscode/settings.json |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,3 @@ | ||
## Changes in 0.1.0 (in development) | ||
|
||
Initial version of STAC Data Store. |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,21 @@ | ||
MIT License | ||
|
||
Copyright (c) 2024 Brockmann Consult GmbH | ||
|
||
Permission is hereby granted, free of charge, to any person obtaining a copy | ||
of this software and associated documentation files (the "Software"), to deal | ||
in the Software without restriction, including without limitation the rights | ||
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell | ||
copies of the Software, and to permit persons to whom the Software is | ||
furnished to do so, subject to the following conditions: | ||
|
||
The above copyright notice and this permission notice shall be included in all | ||
copies or substantial portions of the Software. | ||
|
||
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | ||
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | ||
FITNESS FOR A PARTICULAR PURPOSE AND NON INFRINGEMENT. IN NO EVENT SHALL THE | ||
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | ||
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | ||
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE | ||
SOFTWARE. |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,8 @@ | ||
name: xcube-stac | ||
channels: | ||
- conda-forge | ||
- defaults | ||
dependencies: | ||
# Required | ||
- xarray | ||
- pystac |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,43 @@ | ||
[build-system] | ||
requires = ["setuptools >= 61.2.0"] | ||
build-backend = "setuptools.build_meta" | ||
|
||
[project] | ||
name = "xcube_stac" | ||
dynamic = ["version"] | ||
authors = [ | ||
{name = "Konstantin Ntokas", email = "[email protected]"} | ||
] | ||
description = """\ | ||
xcube data store for accessing stac catalogs\ | ||
""" | ||
keywords = [ | ||
"analysis ready data", "data science", "datacube", "xarray", "zarr", "xcube", "stac" | ||
] | ||
readme = {file = "README.md", content-type = "text/markdown"} | ||
license = {text = "MIT"} | ||
requires-python = ">=3.10" | ||
dependencies = [ | ||
"xarray", | ||
"pystac" | ||
] | ||
|
||
[tool.setuptools.dynamic] | ||
version = {attr = "xcube_stac.__version__"} | ||
|
||
[tool.setuptools.packages.find] | ||
exclude = [ | ||
"test*", | ||
"doc*" | ||
] | ||
|
||
[project.optional-dependencies] | ||
dev = [ | ||
"pytest", | ||
"flake8" | ||
] | ||
|
||
[project.urls] | ||
Repository = 'https://github.com/xcube-dev/xcube-stac' | ||
Issues = 'https://github.com/xcube-dev/xcube-stac/issues' | ||
Changelog = 'https://github.com/xcube-dev/xcube-stac/blob/main/CHANGES.md' |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,53 @@ | ||
# The MIT License (MIT) | ||
# Copyright (c) 2024 by the xcube development team and contributors | ||
# | ||
# Permission is hereby granted, free of charge, to any person obtaining a | ||
# copy of this software and associated documentation files (the "Software"), | ||
# to deal in the Software without restriction, including without limitation | ||
# the rights to use, copy, modify, merge, publish, distribute, sublicense, | ||
# and/or sell copies of the Software, and to permit persons to whom the | ||
# Software is furnished to do so, subject to the following conditions: | ||
# | ||
# The above copyright notice and this permission notice shall be included in all | ||
# copies or substantial portions of the Software. | ||
# | ||
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | ||
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | ||
# FITNESS FOR A PARTICULAR PURPOSE AND NON INFRINGEMENT. IN NO EVENT SHALL THE | ||
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | ||
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | ||
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE | ||
# SOFTWARE. | ||
|
||
import unittest | ||
|
||
from xcube.util.extension import ExtensionRegistry | ||
from xcube_stac.plugin import init_plugin | ||
|
||
|
||
class XcubePluginTest(unittest.TestCase): | ||
def test_plugin(self): | ||
"""Assert xcube extensions registered by xcube-stac""" | ||
registry = ExtensionRegistry() | ||
init_plugin(registry) | ||
self.assertEqual( | ||
{ | ||
"xcube.core.store": { | ||
"stac": { | ||
"component": "<not loaded yet>", | ||
"description": "STAC DataStore", | ||
"name": "stac", | ||
"point": "xcube.core.store", | ||
} | ||
}, | ||
"xcube.core.store.opener": { | ||
"dataset:zarr:stac": { | ||
"component": "<not loaded yet>", | ||
"description": "xarray.Dataset from STAC API", | ||
"name": "dataset:zarr:stac", | ||
"point": "xcube.core.store.opener", | ||
} | ||
}, | ||
}, | ||
registry.to_dict(), | ||
) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,35 @@ | ||
# The MIT License (MIT) | ||
# Copyright (c) 2024 by the xcube development team and contributors | ||
# | ||
# Permission is hereby granted, free of charge, to any person obtaining a | ||
# copy of this software and associated documentation files (the "Software"), | ||
# to deal in the Software without restriction, including without limitation | ||
# the rights to use, copy, modify, merge, publish, distribute, sublicense, | ||
# and/or sell copies of the Software, and to permit persons to whom the | ||
# Software is furnished to do so, subject to the following conditions: | ||
# | ||
# The above copyright notice and this permission notice shall be included in all | ||
# copies or substantial portions of the Software. | ||
# | ||
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | ||
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | ||
# FITNESS FOR A PARTICULAR PURPOSE AND NON INFRINGEMENT. IN NO EVENT SHALL THE | ||
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | ||
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | ||
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE | ||
# SOFTWARE. | ||
|
||
import unittest | ||
from xcube_stac.stac import Stac | ||
|
||
|
||
class StacTest(unittest.TestCase): | ||
|
||
def test_open_data(self): | ||
stac_instance = Stac("url") | ||
with self.assertRaises(NotImplementedError) as cm: | ||
stac_instance.open_data("data_id1") | ||
self.assertEqual( | ||
"open_data() operation is not supported yet", | ||
f"{cm.exception}", | ||
) |
Oops, something went wrong.