supplement: add abspath to genomes given individually

wwood · Jun 20, 2024 · e774800 · e774800
1 parent 022aa7c
commit e774800
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/singlem/supplement.py b/singlem/supplement.py
@@ -840,6 +840,8 @@ def supplement(self, **kwargs):
             for file_list in new_genome_fasta_files_list:
                 with open(file_list) as f:
                     new_genome_fasta_files = [os.path.abspath(x.strip()) for x in f.readlines()]
+        else:
+            new_genome_fasta_files = [os.path.abspath(x) for x in new_genome_fasta_files]
 
         if input_metapackage is None:
             old_metapackage = Metapackage.acquire_default()