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R/package_installation_info.R

@@ -1,70 +1,111 @@
-package_installation_info <- function(pkg, lib.loc = NULL) {
-
-  desc <- package_description(
-    pkg,
-    lib.loc = lib.loc,
-    fields = c(
-      "Version", "URL", "Repository", "RemoteType",
-      "RemoteUsername", "RemoteRepo", "GithubUsername", "GithubRepo",
-      "RemoteUrl", "biocViews"
-    )
-  )
-
-  version     <- desc[["Version"]]
-  repo        <- desc[["Repository"]]
-  remote_type <- desc[["RemoteType"]]
-  gh_username <- desc[["GithubUsername"]] %||% desc[["RemoteUsername"]]
-  gh_repo     <- desc[["GithubRepo"]] %||% desc[["RemoteRepo"]]
-  remote_url  <- desc[["RemoteUrl"]]
-  bioc_views  <- desc[["biocViews"]]
-  pkg_urls    <- desc[["URL"]]
-
-  if (is.null(desc[["Version"]]))
-    return(NULL)
-
-  # If no github info set, try getting it from the URL field
-  if ((is.null(gh_username) || is.null(gh_repo)) && !is.null(pkg_urls)) {
-    pkg_urls   <- strsplit(pkg_urls, ",\\s*")[[1]]
-    github_url <- pkg_urls[is_valid_github_url(pkg_urls)]
-    if (length(github_url) > 0) {
-      github_url  <- github_url[1]
-      gh_username <- github_username_from_url(github_url)
-      gh_repo     <- github_repo_from_url(github_url)
-    }
-  }
-
-  available_sources <- c(
-    if (!is.null(repo)) "repo",
-    if (!is.null(gh_repo) && !is.null(gh_username)) "github",
-    if (!is.null(remote_url)) "remote",
-    if (!is.null(bioc_views)) "bioc"
-  )
-
-  list(
-    Available_Sources = available_sources,
-    Package           = pkg,
-    Version_Installed = version,
-    Repository        = repo,
-    Github_Username   = gh_username,
-    Github_Repository = gh_repo,
-    Remote_URL        = remote_url,
-    Bioc_Views        = bioc_views
-  )
-
-}
-
-
-
-package_description <- function(pkg, lib.loc = NULL, fields = NULL) {
-  tryCatch(
-    pkg |>
-      packageDescription(lib.loc = lib.loc, fields = fields, drop = FALSE) |>
-      keep(\(x) !is.na(x) && x != ""),
-    warning = function(w) {
-      cli::cli_abort(c(
-        "No DESCRIPTION file found for {.pkg {pkg}}",
-        i = "Original warning: {w$message}"
-      ))
-    }
-  )
-}
+package_installation_info <- function(pkg, lib.loc = NULL) {
+
+  desc <- package_description(
+    pkg,
+    lib.loc = lib.loc,
+    fields = c(
+      "Version", "URL", "Repository", "RemoteType",
+      "RemoteUsername", "RemoteRepo", "GithubUsername", "GithubRepo",
+      "RemoteUrl", "biocViews"
+    )
+  )
+
+  version      <- desc[["Version"]]
+
+  if (is.null(desc[["Version"]]))
+    return(NULL)
+
+  repo         <- desc[["Repository"]]
+  remote_type  <- desc[["RemoteType"]]
+  is_github    <- identical(remote_type, "github")
+  is_gitlab    <- identical(remote_type, "gitlab")
+  rmt_username <- desc[["RemoteUsername"]]
+  rmt_repo     <- desc[["RemoteRepo"]]
+  gl_username  <- desc[["GitlabUsername"]] %||% (if (is_gitlab) rmt_username)
+  gl_repo      <- desc[["GitlabRepo"]]     %||% (if (is_gitlab) rmt_repo)
+  gh_username  <- desc[["GithubUsername"]] %||% (if (is_github) rmt_username)
+  gh_repo      <- desc[["GithubRepo"]]     %||% (if (is_github) rmt_repo)
+  remote_url   <- desc[["RemoteUrl"]]
+  bioc_views   <- desc[["biocViews"]]
+  pkg_urls     <- desc[["URL"]]
+
+  url_repo_details <- repo_details_from_urls(pkg_urls)
+
+  # If no github info set, try getting it from the URL field
+  if ((is.null(gh_username) || is.null(gh_repo)) && !is.null(pkg_urls)) {
+    gh_username <- url_repo_details[["Github_Username"]]
+    gh_repo     <- url_repo_details[["Github_Repository"]]
+  }
+
+  # If no gitlab info set, try getting it from the URL field
+  if ((is.null(gl_username) || is.null(gl_repo)) && !is.null(pkg_urls)) {
+    gl_username <- url_repo_details[["Gitlab_Username"]]
+    gl_repo     <- url_repo_details[["Gitlab_Repository"]]
+  }
+
+  available_sources <- c(
+    if (!is.null(repo)) "repo",
+    if (!is.null(gh_repo) && !is.null(gh_username)) "github",
+    if (!is.null(gl_repo) && !is.null(gl_username)) "gitlab",
+    if (!is.null(remote_url)) "remote",
+    if (!is.null(bioc_views)) "bioc"
+  )
+
+  list(
+    Available_Sources = available_sources,
+    Package           = pkg,
+    Version_Installed = version,
+    Repository        = repo,
+    Github_Username   = gh_username,
+    Github_Repository = gh_repo,
+    Gitlab_Username   = gl_username,
+    Gitlab_Repository = gl_repo,
+    Remote_URL        = remote_url,
+    Bioc_Views        = bioc_views
+  )
+
+}
+
+repo_details_from_urls <- function(x) {
+  if (is.null(x))
+    return(NULL)
+
+  pkg_urls <- strsplit(x, ",\\s*")[[1]]
+
+  out <- list(
+    Github_Username   = NULL,
+    Github_Repository = NULL,
+    Gitlab_Username   = NULL,
+    Gitlab_Repository = NULL
+  )
+
+  github_urls <- pkg_urls[is_github_url(pkg_urls)]
+  if (length(github_urls) > 0L) {
+    github_url <- github_urls[1]
+    out[["Github_Username"]]   <- github_username_from_url(github_url)
+    out[["Github_Repository"]] <- github_repo_from_url(github_url)
+  }
+
+  gitlab_urls <- pkg_urls[is_gitlab_url(pkg_urls)]
+  if (length(gitlab_urls) > 0L) {
+    gitlab_url <- gitlab_urls[1]
+    out[["Gitlab_Username"]]   <- gitlab_username_from_url(gitlab_url)
+    out[["Gitlab_Repository"]] <- gitlab_repo_from_url(gitlab_url)
+  }
+
+  out
+}
+
+package_description <- function(pkg, lib.loc = NULL, fields = NULL) {
+  tryCatch(
+    pkg |>
+      packageDescription(lib.loc = lib.loc, fields = fields, drop = FALSE) |>
+      keep(\(x) !is.na(x) && x != ""),
+    warning = function(w) {
+      cli::cli_abort(c(
+        "No DESCRIPTION file found for {.pkg {pkg}}",
+        i = "Original warning: {w$message}"
+      ))
+    }
+  )
+}