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Add figure PMC9949038_3 #20

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10 changes: 10 additions & 0 deletions figure_fetch.log
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2024-09-09 02:55:06 - ==========================================================

2024-09-09 22:27:04 - Starting NCBI PMC Single Figure Fetcher for PMC9949038 Figure 3

2024-09-09 22:27:05 - Successfully downloaded image to figures/PMC9949038__nihpp-2023.02.15.528365v2-f0003.jpg

2024-09-09 22:27:05 - Successfully wrote YAML file to figures/PMC9949038__nihpp-2023.02.15.528365v2-f0003.yml

2024-09-09 22:27:05 - NCBI PMC Single Figure Fetcher completed

2024-09-09 22:27:05 - ==========================================================

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43 changes: 43 additions & 0 deletions figures/PMC9949038__nihpp-2023.02.15.528365v2-f0003.yml
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---
figid: PMC9949038__nihpp-2023.02.15.528365v2-f0003
pmcid: PMC9949038
image_filename: PMC9949038__nihpp-2023.02.15.528365v2-f0003.jpg
figure_link: /pmc/articles/PMC9949038/figure/nihpp-2023.02.15.528365v2-f0003/
number: Figure 3.
figure_title: Increased intratumoral heterogeneity in Cracd KO SCLC tumors
caption: 'A, UMAPs of the scRNA-seq datasets of RPR2 and CRPR2 SCLC tumors.B, UMAPs
of subsets of cells from the global level (left) to SCLC tumor epithelial cells
(right). Each dot represents a single cell, colored by cell type. Tumor epithelial
cells (RPR2 and CRPR2) were replotted into another UMAP (right).C, UMAPs of cell
types within RPR2 (left) and CRPR2 cell subsets (right). The top two genes that
were highly expressed in each cluster were used for cell cluster annotation of the
UMAPs.D, Comparison of proportions of different cell types between the RPR2 and
CRPR2 datasets.E, CytoTRACE scores of RPR2 and CRPR2 datasets were analyzed and
plotted.F, Boxplots of the cell differentiation potential of each cell cluster based
on the CytoTRACE score analysis; diff.: cell differentiation; **: P < 0.01; ***:
P < 0.001.G, GSEA of gene sets associated with the epithelial-mesenchymal transition
pathway and hypoxia pathway in cluster 4 in CRPR2 datasets compared to in RPR2 scRNA-seq
datasets; NES, normalized enrichment score.H, Feature plots displaying the expression
of epithelial-mesenchymal transition marker Vim and Fn1, hypoxia marker Hif1a.I,
Violin (left) and feature (right) plots visualizing Ascl1 and Calca expression between
RPR2 and CRPR2 datasets'
article_title: CRACD loss promotes small cell lung cancer tumorigenesis via EZH2-mediated
immune evasion
citation: Shengzhe Zhang, et al. bioRxiv. 2023 May 17;121(5).
year: '2023'
pub_date: 2023-5-17
epub_date: 2023-5-17
doi: 10.1101/2023.02.15.528365
journal_title: bioRxiv
journal_nlm_ta: bioRxiv
publisher_name: Cold Spring Harbor Laboratory
keywords:
- CRACD
- CRAD
- KIAA1211
- small cell lung cancer
- immune evasion
- EZH2
- PRC2
- immunotherapy
---