Merge branch 'develop'

whitews · Nov 3, 2024 · 777c233 · 777c233
2 parents 182a33d + 2efc802
commit 777c233
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diff --git a/.github/workflows/test-base.yml b/.github/workflows/test-base.yml
@@ -7,7 +7,7 @@ jobs:
   test:
     strategy:
       matrix:
-        python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
+        python-version: ["3.9", "3.10", "3.11", "3.12"]
         platform: [ubuntu-latest, macos-latest, windows-latest]
 
     runs-on: ${{matrix.platform}}

diff --git a/.gitignore b/.gitignore
@@ -1,5 +1,6 @@
 # User-specific stuff:
 .idea
+.vscode
 scratch/
 scratch_data/
 *.png

diff --git a/data/8_color_data_set/8_color_ICS_boolean_gate_testing.wsp b/data/8_color_data_set/8_color_ICS_boolean_gate_testing.wsp
diff --git a/data/8_color_data_set/8_color_ICS_dot_gate_name.wsp b/data/8_color_data_set/8_color_ICS_dot_gate_name.wsp
diff --git a/docs/notebooks/advanced/clustering_comparison_leiden_vs_louvain.ipynb b/docs/notebooks/advanced/clustering_comparison_leiden_vs_louvain.ipynb
diff --git a/docs/notebooks/advanced/compare-mfi-of-gated-events.ipynb b/docs/notebooks/advanced/compare-mfi-of-gated-events.ipynb
diff --git a/docs/notebooks/advanced/dimension_reduction_on_gated_populations.ipynb b/docs/notebooks/advanced/dimension_reduction_on_gated_populations.ipynb
diff --git a/docs/notebooks/advanced/replicate-flowjo-wsp.ipynb b/docs/notebooks/advanced/replicate-flowjo-wsp.ipynb