Build protein database for fusion events

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Bo edited this page Jun 11, 2019 · 2 revisions

This example input was downloaded from STAR-Fusion website (https://github.com/STAR-Fusion/STAR-Fusion/wiki)

library(PGA)
fusion_file <- system.file("extdata/fusion/", 
                           "star-fusion_example_input.tsv",
                           package="PGA")
res <- buildFusionProteinDB(fusion_file,
                            genome_version="hg19")