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Releases: weigertlab/spotiflow

0.5.0

15 Oct 15:48
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What's Changed

  • Extend NMS behaviour
  • Changes to CLI arguments for readability
  • Added option to train from the CLI
  • Documentation improvement

Full Changelog: 0.4.5...0.5.0

0.4.5

07 Oct 18:04
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  • Downgrade CI actions (#18)

Full Changelog: 0.4.4...0.4.5

0.4.4

07 Oct 15:30
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  • Added support for Python 3.12 by dropping distutils from wheel building.
  • Bump docs version automatically when building the docs
  • Fix API display in docs

Full Changelog: 0.4.3...0.4.4

0.4.3

02 Oct 14:48
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  • Changed default logging behaviour (see #17)
  • Added zarr-friendly, multi-GPU prediction script
  • Remove out-of-date scripts

0.4.2

06 Sep 15:03
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  • Allow storing/loading pretrained models and datasets either via the env var SPOTIFLOW_CACHE_DIR or directly through the cache_dir argument (see #15).
  • Bump CI actions to newer versions

Bugfix: setuptools building

29 Aug 14:28
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  • Fix build failing due to setuptools error
  • Assess PyTorch warning (#14)

Native 3D spot prediction

17 Aug 11:05
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  • Added 3D variant of UNet
  • Added 3D SpotsDataset handler
  • Added pre-trained 3D models
  • Trilinear interpolation to retrieve intensity

0.3.3

09 Jul 09:18
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What's Changed

  • Extend CLI parameters and Add Github Actions for Docker . by @migueLib in #11
  • CLI handling of hidden files (#12)

New Contributors

Full Changelog: 0.3.2...0.3.3

0.3.2

17 Jun 15:48
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Preparing upload to conda-forge by removing an unnecessary breaking dependency

0.3.1

17 Jun 10:02
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Pin NumPy to <2.*