fix

waveygang · Aug 11, 2023 · 14ba216 · 14ba216
1 parent 49bd6e5
commit 14ba216
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Showing 4 changed files with 1 addition and 3 deletions.
diff --git a/.github/workflows/test_on_push.yml b/.github/workflows/test_on_push.yml
@@ -28,7 +28,7 @@ jobs:
       - name: Build wfmash
         run: cmake -H. -Bbuild -D CMAKE_BUILD_TYPE=Debug -DWFA_PNG_AND_TSV=ON && cmake --build build -- -j 2
       - name: Test mapping coverage 8 yeast genomes (PAF output)
-        run: ASAN_OPTIONS=detect_leaks=1:symbolize=1 LSAN_OPTIONS=verbosity=0:log_threads=1 build/bin/wfmash data/scerevisiae8.fa.gz -p 95 -m -L -Y '#' > scerevisiae8.paf; scripts/test.sh data/cscerevisiae8.fa.gz.fai scerevisiae8.paf 0.92
+        run: ASAN_OPTIONS=detect_leaks=1:symbolize=1 LSAN_OPTIONS=verbosity=0:log_threads=1 build/bin/wfmash data/scerevisiae8.fa.gz -p 95 -m -L -Y '#' > scerevisiae8.paf; scripts/test.sh data/scerevisiae8.fa.gz.fai scerevisiae8.paf 0.92
       - name: Test mapping+alignment with a subset of the LPA dataset (PAF output)
         run: ASAN_OPTIONS=detect_leaks=1:symbolize=1 LSAN_OPTIONS=verbosity=0:log_threads=1 build/bin/wfmash data/LPA.subset.fa.gz -n 10 -T wflign_info. -u ./ -L > LPA.subset.paf && head LPA.subset.paf
       - name: Test mapping+alignment with a subset of the LPA dataset (SAM output)

diff --git a/data/chm13+grch38.chr20.fa.gz b/data/chm13+grch38.chr20.fa.gz
diff --git a/data/chm13+grch38.chr20.fa.gz.fai b/data/chm13+grch38.chr20.fa.gz.fai
diff --git a/data/chm13+grch38.chr20.fa.gz.gzi b/data/chm13+grch38.chr20.fa.gz.gzi