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28 Open 38 Closed
28 Open 38 Closed
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Issues list

Biopython version may enforce old Python version
#161 opened Sep 27, 2024 by kabu00002
T012- Swagger Mapping Error
#160 opened Aug 27, 2024 by seymasoyler
Structure.from_pdbid broken: MMTF download deprecated
#159 opened Aug 6, 2024 by dominiquesydow
2
[BUG] ImportError: cannot import name 'ParamSpec' from 'typing_extensions'
#158 opened Mar 28, 2024 by yanz-24
Why might the aligner be failing on these PDB files?
#155 opened May 11, 2023 by noahharrison64
Only MDAnalysis superpose alghorithms worked while MMLigner and TheseusAligner did not.
#154 opened May 11, 2023 by njbamboo
Add CITATION.cff
#145 opened Jun 16, 2022 by dominiquesydow
Unpin nbsphinx
#138 opened Jan 10, 2022 by dominiquesydow
@dominiquesydow
Unpin setuptools
#136 opened Jan 9, 2022 by dominiquesydow
@dominiquesydow
TheseusAligner performs a wrong tranformation module-structure-superposition Concerns opencadd.structure.superposition module
#113 opened Oct 31, 2021 by pipaj97
MDAnalysis 2.0.0: Structures fetched by PDB code do not contain elements module-structure Concers opencadd.structure module
#93 opened Aug 27, 2021 by dominiquesydow
1
Use redo to query KLIFS database module-databases-klifs Concerns opencadd.databases.klifs module
#82 opened Jul 6, 2021 by dominiquesydow
@dominiquesydow
Automatize local KLIFS IDs copy (needed for local session) module-databases-klifs Concerns opencadd.databases.klifs module
#81 opened Jul 1, 2021 by dominiquesydow
@dominiquesydow
Change logging level INFO to DEBUG module-structure-pocket Concerns opencadd.structure.pocket module
#79 opened Jun 30, 2021 by dominiquesydow
@dominiquesydow
superposer is insenstive to residues with insertion codes module-structure-superposition Concerns opencadd.structure.superposition module
#56 opened Dec 1, 2020 by dominiquesydow
2
opencadd README: Add list of external resources documentation Improvements or additions to documentation
#52 opened Oct 23, 2020 by dominiquesydow
@dominiquesydow
1
opencadd.structure.pocket: Add features to nglview views module-structure-pocket Concerns opencadd.structure.pocket module
#49 opened Oct 21, 2020 by dominiquesydow
@dominiquesydow
Update biopandas usage: Read pdb from list of strings module-io Concerns opencadd.io module
#48 opened Oct 21, 2020 by dominiquesydow
1
Slow performance of atom selection with MDAnalysis module-structure-superposition Concerns opencadd.structure.superposition module
#47 opened Sep 28, 2020 by dominiquesydow
Unpin biopython and update Bio.Alphabet usage module-structure-superposition Concerns opencadd.structure.superposition module
#46 opened Sep 9, 2020 by jaimergp
Parsing molecules module-io Concerns opencadd.io module
#42 opened Aug 26, 2020 by dominiquesydow
3
ASCONA enhancement New feature or request module-structure-superposition Concerns opencadd.structure.superposition module
#35 opened Jun 5, 2020 by jaimergp
1
Overview of different methods and servers enhancement New feature or request module-structure-superposition Concerns opencadd.structure.superposition module
#31 opened Apr 29, 2020 by jaimergp
Methods inspired by Pymol enhancement New feature or request module-structure-superposition Concerns opencadd.structure.superposition module
#28 opened Apr 21, 2020 by jaimergp
Provide selection API for partial alignment enhancement New feature or request module-structure-superposition Concerns opencadd.structure.superposition module
#26 opened Apr 20, 2020 by jaimergp
1
3
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