issue #1233

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: marginaleffects
 Title: Predictions, Comparisons, Slopes, Marginal Means, and Hypothesis Tests
-Version: 0.23.0
+Version: 0.23.0.1
 Authors@R: 
     c(person(given = "Vincent",
              family = "Arel-Bundock",
@@ -157,6 +157,7 @@ Suggests:
     survey,
     survival,
     svglite,
+    systemfit,
     systemfonts,
     tibble,
     tictoc,
@@ -262,6 +263,7 @@ Collate:
     'methods_stats.R'
     'methods_survey.R'
     'methods_survival.R'
+    'methods_systemfit.R'
     'methods_tidymodels.R'
     'methods_tobit1.R'
     'modelarchive.R'

NAMESPACE

@@ -28,6 +28,7 @@ S3method(get_coef,polr)
 S3method(get_coef,scam)
 S3method(get_coef,selection)
 S3method(get_coef,svyolr)
+S3method(get_coef,systemfit)
 S3method(get_coef,workflow)
 S3method(get_group_names,bracl)
 S3method(get_group_names,brmsfit)
@@ -109,6 +110,7 @@ S3method(get_vcov,orm)
 S3method(get_vcov,pstpm2)
 S3method(get_vcov,scam)
 S3method(get_vcov,stpm2)
+S3method(get_vcov,systemfit)
 S3method(get_vcov,workflow)
 S3method(glance,comparisons)
 S3method(glance,hypotheses)

NEWS.md

@@ -1,5 +1,11 @@
 # News
 
+## Development
+
+Bugs:
+
+* `systemfit` models returned no standard errors when the same variables entered in different parts of the model. Thanks to @mronkko for report #1233.
+
 ## 0.23.0
 
 Breaking change:

R/methods_systemfit.R

@@ -0,0 +1,13 @@
+#' @rdname get_coef
+#' @export
+get_coef.systemfit <- function(model, ...) {
+    out <- stats::coef(model)
+    return(out)
+}
+
+#' @rdname get_vcov
+#' @export
+get_vcov.systemfit <- function(model, ...) {
+    out <- stats::vcov(model)
+    return(out)
+}

inst/tinytest/test-pkg-survfit.R

@@ -0,0 +1,22 @@
+source("helpers.R")
+using("marginaleffects")
+requiet("systemfit")
+requiet("MASS")
+
+# issue #1233: duplicated coefficient names
+set.seed(12345)
+N <- 100
+C <- matrix(c(1, .3, .3,
+              .3,  1, .3,
+              .3, .3,  1), 3, 3)
+colnames(C) <- rownames(C) <- c("x1", "x2", "x3")
+data <- as.data.frame(mvrnorm(N, rep(0, 3), C))
+sys <- with(data, {
+    y1 <- 2 * x1 + 3 * x2 + x3 + 10 * rnorm(N)
+    m1 <- lm(y1 ~ x1 + x2 + x3)
+    y2 <- x1 + 3 * x2 + 2 * x3 + 10 * rnorm(N)
+    m2 <- lm(y2 ~ x1 + x2 + x3)
+    systemfit(list(formula(m1), formula(m2)), data = data)
+})
+h <- hypotheses(sys)
+expect_false(anyNA(h$std.error))