vegemite: sp.ind was not honoured with factor use & diagonalize

vegandevs · Jun 19, 2024 · ed76ad0 · ed76ad0
1 parent 1ae7c57
commit ed76ad0
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/R/vegemite.R b/R/vegemite.R
@@ -67,7 +67,8 @@
                 }
                 ## order factors and sites within factor levels
                 site.ind <- order(ord$constraints, ord$sites)
-                sp.ind <- order(ord$species)
+                if (is.null(sp.ind))
+                    sp.ind <- order(ord$species)
             }
             if (is.null(site.ind))
                 site.ind <- order(tmp)