Add H10 and new H7 ref

config/config_flu_genbank.yaml

@@ -92,6 +92,7 @@ report_group_references:
   H5NX: A-Goose-Guangdong-1-96
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # Surveillance plot options
 # see: workflow_main/scripts/surveillance.py
@@ -110,6 +111,7 @@ surv_group_references:
   H5NX: A-Goose-Guangdong-1-96
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # ---------------
 #    DATABASE
@@ -151,6 +153,7 @@ default_references:
   H5NX: A-Goose-Guangdong-1-96
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # Home page
 show_home_banner: false

config/config_flu_gisaid.yaml

@@ -120,6 +120,7 @@ report_group_references:
   H5NX: A-Viet-Nam-1203-2004
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # Surveillance plot options
 # see: workflow_main/scripts/surveillance.py
@@ -138,6 +139,7 @@ surv_group_references:
   H5NX: A-Viet-Nam-1203-2004
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # ---------------
 #    DATABASE
@@ -180,6 +182,7 @@ default_references:
   H5NX: A-Viet-Nam-1203-2004
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # Home page
 show_home_banner: false

config/config_flu_gisaid_dev.yaml

@@ -125,6 +125,7 @@ report_group_references:
   H5NX: A-Goose-Guangdong-1-96
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # Surveillance plot options
 # see: workflow_main/scripts/surveillance.py
@@ -143,6 +144,7 @@ surv_group_references:
   H5NX: A-Goose-Guangdong-1-96
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # ---------------
 #    DATABASE
@@ -185,6 +187,7 @@ default_references:
   H5NX: A-Goose-Guangdong-1-96
   H7NX: A-Shanghai-02-2013
   H9NX: A-Hong-Kong-1073-99
+  H10NX: A-Jiangsu-428-2021
 
 # Home page
 show_home_banner: false

static_data/flu/genes.csv

@@ -138,6 +138,16 @@ H7NX,A-Shanghai-02-2013,M1,7,1..759,1,0,[],
 H7NX,A-Shanghai-02-2013,M2,7,1..26;715..982,1,0,[],
 H7NX,A-Shanghai-02-2013,NEP,8,1..30;503..838,1,0,[],
 H7NX,A-Shanghai-02-2013,NS1,8,1..654,1,0,[],
+H7NX,A-Anhui-1-2013,PB2,1,1..2280,1,0,[],
+H7NX,A-Anhui-1-2013,PB1,2,1..2274,1,0,[],
+H7NX,A-Anhui-1-2013,PA,3,1..2151,1,0,[],
+H7NX,A-Anhui-1-2013,HA,4,1..1683,1,18,"[{""name"": ""signal peptide"", ""ranges"": [[1, 18]]}, {""name"": ""HA1"", ""ranges"": [[19, 339]]}, {""name"": ""HA2"", ""ranges"": [[340, 560]]}]",
+H7NX,A-Anhui-1-2013,NP,5,1..1497,1,0,[],
+H7NX,A-Anhui-1-2013,NA,6,1..1398,1,0,[],
+H7NX,A-Anhui-1-2013,M1,7,1..759,1,0,[],
+H7NX,A-Anhui-1-2013,M2,7,1..26;715..982,1,0,[],
+H7NX,A-Anhui-1-2013,NEP,8,1..30;503..838,1,0,[],
+H7NX,A-Anhui-1-2013,NS1,8,1..654,1,0,[],
 H9NX,A-Hong-Kong-1073-99,PB2,1,28..2307,1,0,[],
 H9NX,A-Hong-Kong-1073-99,PB1,2,24..2300,1,0,[],
 H9NX,A-Hong-Kong-1073-99,PA,3,21..2171,1,0,[],
@@ -148,6 +158,26 @@ H9NX,A-Hong-Kong-1073-99,M1,7,33..791,1,0,[],
 H9NX,A-Hong-Kong-1073-99,M2,7,33..59;748..1014,1,0,[],
 H9NX,A-Hong-Kong-1073-99,NEP,8,27..56;529..864,1,0,[],
 H9NX,A-Hong-Kong-1073-99,NS1,8,27..719,1,0,[],
+H10NX,A-Jiangsu-428-2021,PB2,1,28..2307,1,0,[],
+H10NX,A-Jiangsu-428-2021,PB1,2,25..2298,1,0,[],
+H10NX,A-Jiangsu-428-2021,PA,3,25..2175,1,0,[],
+H10NX,A-Jiangsu-428-2021,HA,4,20..1705,1,16,"[{""name"": ""signal peptide"", ""ranges"": [[1, 16]]}, {""name"": ""HA1"", ""ranges"": [[17, 340]]}, {""name"": ""HA2"", ""ranges"": [[341, 561]]}]",
+H10NX,A-Jiangsu-428-2021,NP,5,46..1542,1,0,[],
+H10NX,A-Jiangsu-428-2021,NA,6,19..1428,1,0,[],
+H10NX,A-Jiangsu-428-2021,M1,7,26..784,1,0,[],
+H10NX,A-Jiangsu-428-2021,M2,7,26..51;740..1007,1,0,[],
+H10NX,A-Jiangsu-428-2021,NS1,8,27..680,1,0,[],
+H10NX,A-Jiangsu-428-2021,NEP,8,27..56;529..864,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,PB2,1,1..2280,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,PB1,2,1..2274,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,PA,3,1..2151,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,HA,4,1..1686,1,16,"[{""name"": ""signal peptide"", ""ranges"": [[1, 16]]}, {""name"": ""HA1"", ""ranges"": [[17, 340]]}, {""name"": ""HA2"", ""ranges"": [[341, 561]]}]",
+H10NX,A-Jiangxi-Donghu-346-2013,NP,5,1..1497,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,NA,6,1..1413,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,M1,7,1..759,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,M2,7,1..26;715..982,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,NS1,8,1..654,1,0,[],
+H10NX,A-Jiangxi-Donghu-346-2013,NEP,8,1..30;503..838,1,0,[],
 B-yam,B-Massachusetts-02-2012,HA,4,1..1755,1,15,"[{""name"": ""signal peptide"", ""ranges"": [[1, 15]]}, {""name"": ""HA1"", ""ranges"": [[16, 361]]}, {""name"": ""HA2"", ""ranges"": [[362, 584]]}]",
 B-yam,B-Massachusetts-02-2012,NA,6,1..1401,1,0,[],
 B-yam,B-Massachusetts-02-2012,NB,6,3..296,1,0,[],

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/1.fa

@@ -0,0 +1,31 @@
+>EPI1868397|A/Jiangsu/428/2021|EPI_ISL_2380100|PB2|Original|WHO Chinese National Influenza Center
+agcaaaagcaggtcaaatatattcaatatggaaagaataaaagaactaagagatttgatgtcacagtctcgcactcgcga
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+ttaggatgaagtggatgatggcaatgaagtatccaattacagcagacaaaaggataatggagatgatcccagaaaggaat
+gagcacggtcaaaccctttggagcaagacaaatgatgctggatcagacagagtgatggtgtcacctctagctgtgacgtg
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+taaaacacgggactttcggccccgttcacttccgaaaccaggttaaaatacgacgcagggtcgacataaacccaggccat
+gcagatcttagtgctaaggaagcacaagatgtcatcatggaggtcgtattcccaaacgaagttggagccagaatattaac
+atcagagtcacagttaactataaccaaggaaaagaaggaggagcttcaagactgcaaaattgccccattaatggtggctt
+acatgttggagagggaactggttcgaaaaacaagatttctaccagtagctggaggaacaagcagcgtgtatatcgaagta
+ttacatttgacccaggggacctgctgggagcaaatgtacacaccaggaggagaagtgagaaatgatgatgttgatcagag
+tttaattattgcagctagaaatattgttagaagggcaacagtgtcagcagacccgttggcttcgcttttggagatgtgcc
+atagtacacagattggcggggttaggatggttgacatccttagacaaaacccaacagaagaacaggctgtagatatatgt
+aaggcagcgatgggcttaaggatcagttcatccttcagctttggaggtttcactttcaaaaggacaagtggatcatccgt
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+tggttgggcgaagagcaacagccattctaaggaaagcaaccagaagactgatccaactgatagtgagtgggaaagacgaa
+caatcaattgcagaggcaatcatagtggcaatggtattctcacaagaagattgtatgataaaggcagtgagaggtgattt
+gaactttgtcaacagagcaaatcagaggctaaaccccatgcatcaactcctgaggcatttccaaaaggatgcaaagatcc
+tttttcaaaactggggaattgaacccattgacaatgtaatggggatgatcggaatattgcctgacatgacccccagcaca
+gagatgtcattgagaggagtgagagttagtaaaatgggagtagatgagtattccagtactgagagagtggtcgtgagtat
+tgatcgtttcttaagggtccgggaccagagaggaaacatactcttgtctcctgaagaggttagtgaaacacagggaacag
+aaaagctgactataacatattcatcatccatgatgtgggagatcaatggtccggaatcagtgctagttaacacatatcaa
+tggatcatcagaaactgggaaaccgtgaaaattcaatggtcccaagatcctacaatgctatacaataagatggaatttga
+accctttcaatccctagtgcctaaagccgtcagaggcmaatatagtgggttcgtaaggattctattccaacagatgcgtg
+atgtactggggacatttgacactgtccaaataataaaactattaccatttgcagcagccccaccggagcaaagtagaatg
+cagttctcttctctaactgtgaatgtgaggggttcaggaatgagaatagttgtgagaggcaactctcctgtgttcaacta
+caataaggctaccaaaaggctcactgtgcttgggaaggatgcaggtgcattggtggaagacccagatgagggaacagcag
+gagtagaatctgcagtattgaggggatttctgattcttggcaaggaagacaagaggtatgggccagcattgagcatcaat
+gaattgagcaatcttgcgaaaggagagaaggctaatgtgttgatagggcaaggagacgtggtgttggtaatgaaacggaa
+acgggactctagcatacttactgacagtcagacagcgaccaaaaggattcggatggccatcaattaatgtcgaattgttt
+aaaaacgaccttgtttctact

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/2.fa

@@ -0,0 +1,31 @@
+>EPI1868396|A/Jiangsu/428/2021|EPI_ISL_2380100|PB1|Original|WHO Chinese National Influenza Center
+agcaaaagcaggcaaaccatttgaatggatgtcaatccgactttacttttcttgaaagtgccagtgcaaaatgctataag
+taccactttcccttatactggagaccctccatacagccatggaacgggaacagggtacaccatggacacagtcaacagaa
+cacataaatactcagaaaaaggaaaatggacaacgaacacagagactggagcaccccaactcaatccagttgatggacca
+ttacctgaggacaatgagccgagtgggtatgcacaaacggattgtgtattggaagcgatggctttccttgaggaatccca
+cccagggatctttgaaaactcgtgtctcgaaacgatggaagttgttcagcaaacaagagtggataaactgacccaaggcc
+gtcagacctatgactggacgttaaatagaaatcagccggccgctaccgcattggccaacactatagaggtattcagatcg
+aatggcctgacagccaatgaatcagggaggttgatcgatttcctcaaggacgtgatggattccatggataaggaagaaat
+ggagattacaacacatttccagaggaagaggagagtgagggacaacatgaccaagaaaatggttacacagagaacaatag
+ggaagaagaaacaaagactgaacaaaaagagctacctaataagagcactgacattgaacacaatgacaaaggatgctgaa
+aggggcaagttgaaaaggagagcaattgcaacacccgggatgcaaatcagaggattcgtgtattttgtagaagcactagc
+gaggagcatctgtgagaaacttgaacaatctggcctccctgttggggggaatgagaagaaggctaaactggcaaatgttg
+tgaggaagatgatgactaattcacaagatacagaactctcctttacaattactggggacaacaccaaatggaatgagaat
+caaaatccccgggtgtttctagcaatgataacatacatcacaagaaaccaaccagaatggtttagaaatgtcttaagtat
+tgctcctataatgttctcaaacaagatggcgagattgggaaaggggtatatgttcgaaagtaaaagtatgaagttgcgaa
+cacaagtgccagcggaaatacttgcaaatattgacctgaaatacttcaaccaatcgacgagagagagaatcgagaaaata
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+aggagtttcaattctgaatctagggcagaagaagtacaccaaaaccacatattggtgggacggactccaatcctcagatg
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+gtgttacagtaataaaaaacaatatggtaaacaacgatcttggaccagcaacagcccagatggcccttcagctatttatc
+aaagactacagatacacataccgatgtcacaggggtgatacgcaaattcagacgaggagagcattcgagctgaaaaagct
+gtgggagcagactcgttcaaaggcaggattgttggtttcagatggagggccgaatctgtacaatatccggaatctccaca
+ttccagaggtatgtttgaaatgggaattgatggatgaagaataccaaggcaggttgtgtaatcctatgaatccgtttgtc
+agtcataaggaaattgattcagtcaacaatgctgtggtgatgccagcccatggcccggccaaaagcatggagtatgatgc
+cgttgcaaccacacattcatggattcctaagaggaatcgctccattctcaacaccagtcaaagagggattcttgaggacg
+aacatatgtatcagaaatgctgcaacctattcgaaaagttcttccccagcagttcgtacaggaggccagttggaatttcc
+agcatggtggaggccatggtgtctagggcccgaattgatgcacgaattgacttcgaatctggaaggattaagaaagaaga
+gtttgctgagatcatgaagatctgttccaccattgaagagctcagacggcaaaaatagtgaatttagcttgtccttcatg
+aaaaaatgccttgtttctact

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/3.fa

@@ -0,0 +1,29 @@
+>EPI1868395|A/Jiangsu/428/2021|EPI_ISL_2380100|PA|Original|WHO Chinese National Influenza Center
+agcaaaagcaggtactgatccaaaatggaagactttgtgcgacaatgcttcaatccaatgatcgtcgagcttgcggaaaa
+ggcaatgaaagagtatggggaagatccgaaaatcgaaacaaacaaattcgcatcaatatgcacacacttagaagtctgct
+tcatgtattctgatttccacttcattgacgaacgaggcgaatcaactattattgaatctggcgatccaaatgtattgttg
+aaacatcgatttgaaataatcgaagggagagaccgaacaatggcatggacagtggtgaatagtatctgcaacaccaccgg
+tgtcgaaaaacccaaatttctcccggatctgtatgactacaaggaaaaccgattcattgaaattggagtgaccaggaggg
+aagtccacatatattacctagagaaagctaataaaataaaatccgagaagacacacatccacattttctcattcactgga
+gaagaaatggccaccaaagcagattacactcttgatgaggaaagcagggcaagaatcaaaaccaggctgttcaccataag
+gcaggagatggccagcaggggtctatgggattcctttcgtcagtccgaaagaggcgaagaaacaattgaggaaagatttg
+aaatcacaggaaccatgcgcaggcttgccgaccaaagtctcccaccgaacttctccagccttgaaaactttagagcctat
+gtggatggattcgaaccgaacggctgcattgagggcaagctttctcaaatgtcgaaagaagtgaacgcccgaatcgagcc
+atttctaaagacaacaccacgcccgctcagattgcctaatgggcctccctgttctcagcggtcgaaattcttgctgatgg
+atgctctaaagttaagcattgaggacccaagccacgaaggggaggggataccgctatatgatgcgatcaaatgcatgaaa
+acgttcttcgggtggaaagagcccaacattatcaaaccacatgagaagggcataaaccccaactatctccttacttggaa
+gcaggtgctgtcagaacttcaagacattgaaaatgaagagaagatcccaaggacaaaaaacatgaagaaaacaagccaat
+taaagtgggcacttggtgagaacatggcaccggagaaggtggactttgaggattgtaaagatgtcaacgacctgaaacag
+tacgacagtgatgagccagagcccagatcactagcatgttggatccagaatgaattcaacaaagcatgtgaattgactga
+ctcaagctgggtagagcttgacgaaataggggaagatgttgccccaattgaacacattgcaagcatgagaaggaattatt
+ttacagcagaggtatcccactgcagggctactgaatacataatgaagggagtgtacataaatacagctttgctcaatgca
+tcttgtgcagccatggatgattttcaactgattccaatgataagtaaatgcagaaccaaagagggaagacgtaaaacaaa
+cctatatggattcattataaaaggaagatcccatttgaggaatgataccgatgtggtgaactttgtgagtatggaatttt
+cccttaccgacccaaggttggaaccacaaaaatgggaaaagtattgtgttcttgaagtaggggatatgctcctgcgaacg
+gcaataggccaagtgtcaagacccatgtttctgtatgtgagaaccaatgggacctccaaaatcaagatgaaatggggtat
+ggaaatgagacgttgccttctccagtctctccaacagatcgagagtatgattgaagctgaatcctccgtcaaagagaaag
+acctgactaaagaattctttgaaaacaaatcagaaacatggccaattggagaatcacctaagggagtggaggaaggttcc
+attggaaaggtgtgcagaaccttactagcaaaatctgtattcaacagcttatatgcatctccgcaactcgagggattctc
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+tatatgaagcaatcgaggagtgcctgattaatgatccctgggttttgcttaatgcatcttggttcaactccttcctcaca
+catgcactaagatagttgtggcaatgctactatttgctatccatactgtccaaaaaagtaccttgtttctact

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/4.fa

@@ -0,0 +1,23 @@
+>EPI1868394|A/Jiangsu/428/2021|EPI_ISL_2380100|HA|Original|WHO Chinese National Influenza Center
+agcaaaagcaggggtcacaatgtacaaaatagtagtgataatcgcgttccttggaactgtgaaggctcttgataagatct
+gcctgggacatcatgcagtggccaatgggaccattgtaaagactctcacaagtgaacaggaagaggtgacaaatgctact
+gagacagtggagagcaaaggcctaaacaaattatgtatgaagggaaggaaccataaagacctgggcaactgccatccaat
+aggaatgctaataggaacaccagcttgtgacctgcaccttacagggacatgggacactctcattgagcgagaaaatgcta
+ttgcttattgctaccctggagctactataaatgaagaagcactgaggcagaaaataatggaaagtgggggaatcagcaaa
+ataagcaccggatttacttatggatcttccataaattcagccgggaccactaaagcatgcatgagaaatggagaaaatag
+cttttatgcagagcttaagtggctagtatcaaagaacaagggacaaaatttccctcagaccacgaacacttacagaaaca
+cagacacggctgaacatctcataatgtggggaattcatcacccctctagcactcaagagaagaatgacttgtatgggaca
+caatcactgtccatatcagtcggaagttccacttactacagcaattttgtaccagttgttggagcaagaccccgggtcaa
+tggacagagtagcakaatcgattttcactggacattggtacagccaggtgataatatcaccttctcacacaatgggggcc
+tgatagcaccgagccgagttagcaaattaattgggagaggcttggggattcaatctgatgcaccaatagacaataattgt
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+aatgctcagggcacaggccaagccgctgattacaagagtactcaggcagctattgaccaaatcactgggaaactgaatag
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+tcaattggactaaggactcaataaccgacatttggacttatcaagctgagctattggtagcaatggagaaccagcacaca
+atcgatatggctgattcagaaatgttgaatctatatgaaagagtgagaaaacaactcaggcaaaatgcagaagaagatgg
+gaaagggtgtttcgaaatatatcacacttgtgatgattcatgcatggagagcataagaaacaacacatacgaccattcac
+agtacagagaagaagctattttaaaaagactgaatatcaacccagtgacactctcttctggctataaagacatcattctc
+tggtttagcttcggggcatcatgttttgttcttttagccgttgtcgtgggtcttgtcttcttttgtttgaaaaatggaaa
+catgcgatgcacaatctgtatttagttaaaaacacccttgtttctact

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/5.fa

@@ -0,0 +1,21 @@
+>EPI1868393|A/Jiangsu/428/2021|EPI_ISL_2380100|NP|Original|WHO Chinese National Influenza Center
+agcaaaagcagggtagataatcactcactgagtgacatcaacatcatggcgtctcaaggcaccaaacgatcctatgaaca
+gatggagactggtggagaacgccagaatgctactgagatcagggcatctgtcggaagaatggttagcggcattgggagat
+tctacatacaaatgtgtacagaactcaaactcagtgacaatgaagggaggctgatccagaacagtataacaatagagaga
+atggtactctcagcatttgatgaaagaaggaaccgatacctggaagagcaccccagtgcaggaaaggacccgaagaaaac
+tggaggcccaatttaccgaagaagagacgggaaatgggtgagagagctgatcctgtatgacaaggaggaaatcaggagaa
+tttggcgtcaagcgaacaatggagaagacgcaactgctggtcttacccatctgatgatatggcattccaatctaaatgat
+gccacatatcagagaacgagagctctcgtacgtactggaatggaccccagaatgtgctctctgatgcaaggatcaactct
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+tgcagaggagtatgacaattaaagaaaaatacccttgtttctact

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/6.fa

@@ -0,0 +1,20 @@
+>EPI1868392|A/Jiangsu/428/2021|EPI_ISL_2380100|NA|Original|WHO Chinese National Influenza Center
+agcaaaagcaggtgcgaaatgaatccaaatcagaagataataacactcggtgtagtgaacacaactctgtcaacattagc
+cctcctcattggaattgggaatcagattttcaacattgttatacatgagaaagtaggagtacatcaaactgtggtatgcc
+caacaacaacacccacagtggtaccaaactgcagtgaaaccacaattacatacaacaacactgtggtaaacaacataaca
+acaacaatagtaaataaagcggaaaagcagttcaagtcctcactgccactgtgtcccttccgaggcttcttccccttcca
+taaggacaatgcaatacgattgggtgaaaacaaaggtgtaatagtcacaagggagccctatgtcagttgtgacaatgatg
+attgctggtccttcgcccttgcccaaggggctctgctaggaactaaacacagcaatggaaccataaaagatagaacaccg
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+gactagacaatgaacctggatcgggaaattggcctgatggttccaacattgggttcatgcccaagtaacagaaaaagcac
+cttgtttctact

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/7.fa

@@ -0,0 +1,14 @@
+>EPI1868391|A/Jiangsu/428/2021|EPI_ISL_2380100|MP|Original|WHO Chinese National Influenza Center
+agcaaaagcaggtagatgtttaaagatgagtcttctaaccgaggtcgaaacgtacgttctctctatcattccatcaggcc
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+ctgtggatgttgacgatggtcattttgtcaacatagagctgaagtaaaaaactaccttgtttctact

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/8.fa

@@ -0,0 +1,13 @@
+>EPI1868390|A/Jiangsu/428/2021|EPI_ISL_2380100|NS|Original|WHO Chinese National Influenza Center
+agcaaaagcagggtgacaaagacataatggattccaacacagtatcaagcttccaggtagactgctttctttggcatgtt
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+gagataagatggttgattgaagaagtacgacatagattaaaaattacggagaatagctttgagcaaataacttttatgca
+agccttacaactattgcttgaagtggagcaagagataagaactttctcgtttcagcttatttaatgataaaaaacaccct
+tgtttctact

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/DESCRIPTION

@@ -0,0 +1 @@
+A/Jiangsu/428/2021 EPI_ISL_2380100

static_data/flu/mut_references/H10NX/A-Jiangsu-428-2021/NOTES

@@ -0,0 +1,10 @@
+Original Passage
+
+PB2 A/Jiangsu/428/2021  2341    EPI1868397
+PB1 A/Jiangsu/428/2021  2341    EPI1868396
+PA  A/Jiangsu/428/2021    2233    EPI1868395  
+HA  A/Jiangsu/428/2021    1728    EPI1868394  
+NP  A/Jiangsu/428/2021    1565    EPI1868393  
+NA  A/Jiangsu/428/2021    1452    EPI1868392  
+MP  A/Jiangsu/428/2021    1027    EPI1868391  
+NS  A/Jiangsu/428/2021    890 EPI1868390