reorganize

vazirilab · May 28, 2018 · 2f7f0a8 · 2f7f0a8
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diff --git a/SID-manual.docx b/SID-manual.docx
diff --git a/SIDdemo.mlx b/SIDdemo.mlx
diff --git a/build.m → build/build.m b/build.m → build/build.m
diff --git a/internal/LS_nnls.m → src/LS_nnls.m b/internal/LS_nnls.m → src/LS_nnls.m
diff --git a/internal/SNR_order.m → src/SNR_order.m b/internal/SNR_order.m → src/SNR_order.m
diff --git a/internal/S_update.m → src/S_update.m b/internal/S_update.m → src/S_update.m
diff --git a/internal/T_update.m → src/T_update.m b/internal/T_update.m → src/T_update.m
diff --git a/internal/compute_std_image.m → src/compute_std_image.m b/internal/compute_std_image.m → src/compute_std_image.m
diff --git a/internal/crop.m → src/crop.m b/internal/crop.m → src/crop.m
diff --git a/internal/fast_NMF.m → src/fast_NMF.m b/internal/fast_NMF.m → src/fast_NMF.m
diff --git a/internal/fast_NSF_recon.m → src/fast_NSF_recon.m b/internal/fast_NSF_recon.m → src/fast_NSF_recon.m
diff --git a/internal/fast_nnls.m → src/fast_nnls.m b/internal/fast_nnls.m → src/fast_nnls.m
diff --git a/internal/filter_recon.m → src/filter_recon.m b/internal/filter_recon.m → src/filter_recon.m
diff --git a/internal/find_kernel.m → src/find_kernel.m b/internal/find_kernel.m → src/find_kernel.m
diff --git a/internal/forwardproject.m → src/forwardproject.m b/internal/forwardproject.m → src/forwardproject.m
diff --git a/internal/generate_Ca_kernel.m → src/generate_Ca_kernel.m b/internal/generate_Ca_kernel.m → src/generate_Ca_kernel.m
diff --git a/internal/generate_LFM_library_CPU.m → src/generate_LFM_library_CPU.m b/internal/generate_LFM_library_CPU.m → src/generate_LFM_library_CPU.m
diff --git a/internal/generate_LFM_library_GPU.m → src/generate_LFM_library_GPU.m b/internal/generate_LFM_library_GPU.m → src/generate_LFM_library_GPU.m
diff --git a/internal/generate_data.m → src/generate_data.m b/internal/generate_data.m → src/generate_data.m
diff --git a/internal/generate_kernel.m → src/generate_kernel.m b/internal/generate_kernel.m → src/generate_kernel.m
diff --git a/internal/generate_template.m → src/generate_template.m b/internal/generate_template.m → src/generate_template.m
diff --git a/internal/incremental_temporal_update_gpu.m → src/incremental_temporal_update_gpu.m b/internal/incremental_temporal_update_gpu.m → src/incremental_temporal_update_gpu.m
diff --git a/internal/initialize_nnmf.m → src/initialize_nnmf.m b/internal/initialize_nnmf.m → src/initialize_nnmf.m
diff --git a/internal/iterate_cluster.m → src/iterate_cluster.m b/internal/iterate_cluster.m → src/iterate_cluster.m
diff --git a/internal/merge_filters.m → src/merge_filters.m b/internal/merge_filters.m → src/merge_filters.m
diff --git a/internal/par_compute_std_image.m → src/par_compute_std_image.m b/internal/par_compute_std_image.m → src/par_compute_std_image.m
diff --git a/internal/par_rank_1_factorization.m → src/par_rank_1_factorization.m b/internal/par_rank_1_factorization.m → src/par_rank_1_factorization.m
diff --git a/internal/project_forward_patched.m → src/project_forward_patched.m b/internal/project_forward_patched.m → src/project_forward_patched.m
diff --git a/internal/rank_1_factorization.m → src/rank_1_factorization.m b/internal/rank_1_factorization.m → src/rank_1_factorization.m
diff --git a/internal/read_sensor_movie.m → src/read_sensor_movie.m b/internal/read_sensor_movie.m → src/read_sensor_movie.m
diff --git a/internal/reg_nnls.m → src/reg_nnls.m b/internal/reg_nnls.m → src/reg_nnls.m
diff --git a/internal/segment_component.m → src/segment_component.m b/internal/segment_component.m → src/segment_component.m
diff --git a/internal/spatial_SID_update.m → src/spatial_SID_update.m b/internal/spatial_SID_update.m → src/spatial_SID_update.m
diff --git a/internal/temporal_SID_update.m → src/temporal_SID_update.m b/internal/temporal_SID_update.m → src/temporal_SID_update.m
diff --git a/internal/total_deconv.m → src/total_deconv.m b/internal/total_deconv.m → src/total_deconv.m
diff --git a/internal/update_spatial_component.m → src/update_spatial_component.m b/internal/update_spatial_component.m → src/update_spatial_component.m
diff --git a/internal/xval.m → src/xval.m b/internal/xval.m → src/xval.m