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valentynbez/README.md

Hi there 👋 Support Ukraine

Welcome to my GitHub!

  • PhD Student @ Sunagawa Lab, ETH Zürich
  • Doing research in human gut metagenome and viromics. 🦠
  • QIIME 2 Forum moderator.
  • MD with passion for data science, software engineering and bioinformatics. 👨‍🏫
  • Open for cooperation. 🤝

Pinned Loading

  1. bioinf-mcb/Metagenomic-DeepFRI bioinf-mcb/Metagenomic-DeepFRI Public

    Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.

    Python 32 6

  2. motu-tool/q2-mOTUs motu-tool/q2-mOTUs Public

    Python 8 1

  3. bioinf-mcb/metagenome_assembly bioinf-mcb/metagenome_assembly Public

    WDL Workflow for metagenome assembly

    Python 9 3

  4. bioinf-mcb/gantt-chart bioinf-mcb/gantt-chart Public

    Python code for easy Gantt chart generation

    Jupyter Notebook 4

  5. camda2021-dili camda2021-dili Public

    CAMDA 2021 winning solution for "Literature AI for Drug Induced Liver Injury" challenge

    Jupyter Notebook 1