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@Faizal-Eeman Faizal-Eeman released this 29 Jul 21:21
· 80 commits to main since this release
v4.0.0-rc.1
686bd4e
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Merge PR #57 to main.

Added

  • Add the Issue Report template
  • Add the Pull Request template
  • Add GPL 2.0

Fixed

  • Fix Issue #55: fix F2 detection
  • Fix Issue #32: remove option '--exclude' in delly cnv
  • Fix Issue #33: should pass the mappability_map file instead of the exclusion file to regenotype_gCNV_Delly

Changed

  • Change the input file schema by removing variant_type,reference_fasta,reference_fasta_index, put them into template.config.
  • Change partition types from lowmem/midmem/execute to F2/F32/F72/M64.
  • Standardize the output structure.
  • Standardize the configuration structure.
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