chore: run black code formatter

Dockerfile

@@ -1,10 +1,8 @@
 # To run: docker run -v /path/to/wsgi.py:/var/www/manifestservice/wsgi.py --name=manifestservice -p 81:80 manifestservice
 # To check running container: docker exec -it manifestservice /bin/bash
 
-
 FROM quay.io/cdis/python-nginx:master
 
-RUN echo "7" && ls
 ENV appname=manifestservice
 
 # number of uwsgi worker processes
@@ -16,32 +14,30 @@ RUN apk update \
     && apk add postgresql-libs postgresql-dev libffi-dev libressl-dev \
     && apk add linux-headers musl-dev gcc \
     && apk add curl bash git vim
-RUN echo "17" && ls
+
 COPY . /$appname
 COPY ./deployment/uwsgi/uwsgi.ini /etc/uwsgi/uwsgi.ini
 COPY ./deployment/uwsgi/wsgi.py /$appname/wsgi.py
 COPY ./deployment/nginx/nginx.conf /etc/nginx/
 COPY ./deployment/nginx/uwsgi.conf /etc/nginx/conf.d/nginx.conf
 WORKDIR /$appname
-RUN echo "24" && ls
 
 RUN python -m pip install --upgrade pip && pip install pipenv && pipenv install
 
-RUN echo "26" && ls
 RUN mkdir -p /var/www/$appname \
     && mkdir -p /var/www/.cache/Python-Eggs/ \
     && mkdir /run/nginx/ \
     && ln -sf /dev/stdout /var/log/nginx/access.log \
     && ln -sf /dev/stderr /var/log/nginx/error.log \
     && chown nginx -R /var/www/.cache/Python-Eggs/ \
     && chown nginx /var/www/$appname
-RUN echo "34" && ls
+
 EXPOSE 80
-RUN echo "36"
+
 RUN COMMIT=`git rev-parse HEAD` && echo "COMMIT=\"${COMMIT}\"" >$appname/version_data.py \
     && VERSION=`git describe --always --tags` && echo "VERSION=\"${VERSION}\"" >>$appname/version_data.py \
     && python setup.py install
 
 WORKDIR /var/www/$appname
-RUN echo "42" && ls
+
 CMD /$appname/dockerrun.bash

deployment/uwsgi/uwsgi.ini

@@ -12,29 +12,10 @@ vacuum = true
 chdir = /manifestservice/
 uid = nginx
 gid = nginx
-# pythonpath = /usr/local/lib/site-packages/
 virtualenv = $(VENV)
 pythonpath = /usr/local/lib/python3.6/site-packages/
 
 
-# [uwsgi]
-# protocol = uwsgi
-# socket = /var/www/wts/uwsgi.sock
-# buffer-size = 32768
-# chmod-socket = 666
-# master = true
-# harakiri-verbose = 20
-# disable-logging = true
-# wsgi-file=/wts/wsgi.py
-# plugins = python3
-# vacuum = true
-# chdir = /wts/
-# uid = nginx
-# gid = nginx
-# virtualenv = $(VENV)
-# pythonpath = /usr/local/lib/python3.6/site-packages/
-
-
 # Use this to initialize application in worker processes, not master. This
 # prevents the workers from all trying to open the same database
 # connections at startup:

deployment/uwsgi/wsgi.py

@@ -1,2 +1,3 @@
 from manifestservice.api import app
+
 application = app

manifestservice/api.py

@@ -6,6 +6,7 @@
 import os
 import json
 
+
 def create_app():
     app = flask.Flask(__name__)
     app.register_blueprint(manifests_bp, url_prefix="")
@@ -19,30 +20,42 @@ def create_app():
         config_dict = json.loads(config_str)
     except Exception as e:
         print(e)
-        raise ValueError("Unable to parse the provided config file at {}".format(config_path))
-
+        raise ValueError(
+            "Unable to parse the provided config file at {}".format(config_path)
+        )
+
     for key in config_dict:
         app.config[key] = config_dict[key]
 
-    app.config['OIDC_ISSUER'] = 'https://%s/user' % config_dict['hostname']
-    app.config['MANIFEST_BUCKET_NAME'] = config_dict['manifest_bucket_name']
+    app.config["OIDC_ISSUER"] = "https://%s/user" % config_dict["hostname"]
+    app.config["MANIFEST_BUCKET_NAME"] = config_dict["manifest_bucket_name"]
 
-    app.config['AWS_ACCESS_KEY_ID'] = config_dict['aws_access_key_id'].strip()
-    app.config['AWS_SECRET_ACCESS_KEY'] = config_dict['aws_secret_access_key'].strip()
+    app.config["AWS_ACCESS_KEY_ID"] = config_dict["aws_access_key_id"].strip()
+    app.config["AWS_SECRET_ACCESS_KEY"] = config_dict["aws_secret_access_key"].strip()
 
-    os.environ['AWS_ACCESS_KEY_ID'] = config_dict['aws_access_key_id'].strip()
-    os.environ['AWS_SECRET_ACCESS_KEY'] = config_dict['aws_secret_access_key'].strip()
+    os.environ["AWS_ACCESS_KEY_ID"] = config_dict["aws_access_key_id"].strip()
+    os.environ["AWS_SECRET_ACCESS_KEY"] = config_dict["aws_secret_access_key"].strip()
 
-    required_config_variables = ['AWS_SECRET_ACCESS_KEY', 'AWS_ACCESS_KEY_ID', 'OIDC_ISSUER', 'MANIFEST_BUCKET_NAME']
+    required_config_variables = [
+        "AWS_SECRET_ACCESS_KEY",
+        "AWS_ACCESS_KEY_ID",
+        "OIDC_ISSUER",
+        "MANIFEST_BUCKET_NAME",
+    ]
     if not set(required_config_variables).issubset(set(app.config.keys())):
-        raise ValueError("Not all required config variables were provided in {}. Missing: {}".format(config_path, str(
-            set(required_config_variables).difference(set(app.config.keys()))))
+        raise ValueError(
+            "Not all required config variables were provided in {}. Missing: {}".format(
+                config_path,
+                str(set(required_config_variables).difference(set(app.config.keys()))),
+            )
         )
 
     return app
 
+
 app = create_app()
 
+
 @app.route("/_status", methods=["GET"])
 def health_check():
     """
@@ -61,5 +74,5 @@ def health_check():
 
 def run_for_development(**kwargs):
     app.logger.setLevel(logging.INFO)
-    
-    app.run(**kwargs)
+
+    app.run(**kwargs)