Skip to content

Update etlMapping.yaml #3276

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Closed
wants to merge 2 commits into from
Closed
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
32 changes: 10 additions & 22 deletions qa-vpodc.planx-pla.net/etlMapping.yaml
Original file line number Diff line number Diff line change
@@ -1,38 +1,26 @@
mappings:
- name: vpodc_subject
doc_type: subject
- name: vpodc_case
doc_type: case
type: aggregator
root: subject
root: case
props:
- name: project_id
- name: submitter_id
- name: amputation_type
- name: geographic_site
- name: cohort_id
- name: eligibility
- name: index_date
- name: transplanted_organ
- name: consent_codes
- name: unit_geographic_site
- name: derived_parent_subject_id
- name: derived_topmed_subject_id
- name: participant_id
- name: type
- name: projects
- name: vpodc_data_file
doc_type: data_file
doc_type: imaging_file
type: collector
root: None
category: data_file
props:
- name: submitter_id
- name: file_name
- name: file_size
- name: file_format
- name: md5sum
- name: object_id
- name: file_state
- name: error_type
- name: ga4gh_drs_uri
- name: bucket_path
- name: callset
- name: data_format
- name: data_type
- name: data_category
injecting_props:
subject:
props:
Expand Down
Loading