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Print output when unable to parse JSON (#102)
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* Print output when unable to parse JSON

* Apply automatic documentation changes

Co-authored-by: paulineribeyre <[email protected]>
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paulineribeyre and paulineribeyre authored Nov 2, 2021
1 parent 2e62e84 commit 0d3b914
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12 changes: 10 additions & 2 deletions docs/_build/html/_modules/gen3/submission.html
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Original file line number Diff line number Diff line change
Expand Up @@ -379,7 +379,11 @@ <h1>Source code for gen3.submission</h1><div class="highlight"><pre>
<span class="n">output</span> <span class="o">=</span> <span class="n">requests</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="n">api_url</span><span class="p">,</span> <span class="n">auth</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">_auth_provider</span><span class="p">)</span><span class="o">.</span><span class="n">text</span>
<span class="k">if</span> <span class="n">filename</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
<span class="k">if</span> <span class="n">fileformat</span> <span class="o">==</span> <span class="s2">&quot;json&quot;</span><span class="p">:</span>
<span class="n">output</span> <span class="o">=</span> <span class="n">json</span><span class="o">.</span><span class="n">loads</span><span class="p">(</span><span class="n">output</span><span class="p">)</span>
<span class="k">try</span><span class="p">:</span>
<span class="n">output</span> <span class="o">=</span> <span class="n">json</span><span class="o">.</span><span class="n">loads</span><span class="p">(</span><span class="n">output</span><span class="p">)</span>
<span class="k">except</span> <span class="ne">ValueError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">&quot;Output: </span><span class="si">{</span><span class="n">output</span><span class="si">}</span><span class="se">\n</span><span class="s2">Unable to parse JSON: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="s2">&quot;</span><span class="p">)</span>
<span class="k">raise</span>
<span class="k">return</span> <span class="n">output</span>
<span class="k">else</span><span class="p">:</span>
<span class="bp">self</span><span class="o">.</span><span class="n">__export_file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">output</span><span class="p">)</span>
Expand Down Expand Up @@ -411,7 +415,11 @@ <h1>Source code for gen3.submission</h1><div class="highlight"><pre>
<span class="n">output</span> <span class="o">=</span> <span class="n">requests</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="n">api_url</span><span class="p">,</span> <span class="n">auth</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">_auth_provider</span><span class="p">)</span><span class="o">.</span><span class="n">text</span>
<span class="k">if</span> <span class="n">filename</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
<span class="k">if</span> <span class="n">fileformat</span> <span class="o">==</span> <span class="s2">&quot;json&quot;</span><span class="p">:</span>
<span class="n">output</span> <span class="o">=</span> <span class="n">json</span><span class="o">.</span><span class="n">loads</span><span class="p">(</span><span class="n">output</span><span class="p">)</span>
<span class="k">try</span><span class="p">:</span>
<span class="n">output</span> <span class="o">=</span> <span class="n">json</span><span class="o">.</span><span class="n">loads</span><span class="p">(</span><span class="n">output</span><span class="p">)</span>
<span class="k">except</span> <span class="ne">ValueError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">&quot;Output: </span><span class="si">{</span><span class="n">output</span><span class="si">}</span><span class="se">\n</span><span class="s2">Unable to parse JSON: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="s2">&quot;</span><span class="p">)</span>
<span class="k">raise</span>
<span class="k">return</span> <span class="n">output</span>
<span class="k">else</span><span class="p">:</span>
<span class="bp">self</span><span class="o">.</span><span class="n">__export_file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">output</span><span class="p">)</span>
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