Releases: uc-cdis/bih_dictionary
0.1.1: Updated dataset node.
Adding additional dataset node properties to further describe the APIs, databases, versions, hosts, and owners of the metadata and data files described in MIDRC BIH.
What's Changed
- Update pyproject.toml - email by @smvgarcia in #14
- updates to dataset node by @cgmeyer in #15
New Contributors
- @smvgarcia made their first contribution in #14
Full Changelog: 0.1.0...0.1.1
0.1.0: BIH working draft model.
Draft BIH data model with clinical, omics, and imaging nodes.
Successfully tested in QA BIH along with draft ETL mapping.
0.0.8: Adding/shifting properties to support ETL / BIH metadata schema.
Adding/shifting properties to support ETL / BIH metadata schema.
0.0.7: Added imaging properties.
- Updated imaging nodes with properties suggested by ACR.
- Changed "annotation" node name to "image_annotation".
0.0.6: Removed data_file properties from file nodes.
Removed data_file properties from file nodes and added clinical_file node.
0.0.5: Harmonized Clinical Nodes
This is a release to mark the following progress; refinement of clinical, demographic, 'omics, and imaging nodes is ongoing:
Added clinical nodes from OMOP (https://ohdsi.github.io/CommonDataModel/cdm54.html), BloodPAC (https://data.bloodpac.org/dd), BioData Catalyst (https://gen3.biodatacatalyst.nhlbi.nih.gov/DD), and MIDRC (https://data.midrc.org/dd).
Did some preliminary work merging clinical nodes that address the same metadata types, and did made some effort to harmonize data elements within clinical nodes.
0.0.4: Adding draft clinical nodes.
Added some clinical nodes from MIDRC, BDC, GDC, and BloodPAC data commons. Will continue to refine these nodes to simplify the model for BIH purposes.
0.0.3: Added draft genomics nodes.
Genomics nodes were added from the BDC data model and modified to fit BIH purposes:
https://github.com/uc-cdis/gtex-dictionary/
These are draft nodes and will continue to be modified further.
0.0.2: Updating draft BIH data model.
- Removed unused properties from MIDRC nodes (https://github.com/uc-cdis/midrc_dictionary).
- Added draft properties for BIH metadata to nodes.
0.0.1: First draft BIH data dictionary.
This dictionary is very simplified and will be used to load metadata from connected imaging nodes into sheepdog so we can leverage Tube's ETL to ElasticSearch for powering search in the BIH.
In this initial draft version, there are just 4 linear nodes (in addition to the standard program/project/CMC) that mirror the DICOM imaging standard hierarchy:
dataset <- case <- imaging_study <- imaging_series