Source code for generating the figures in the paper "Repurposing Drug Combinations for the Treatment of Brain Cancers."
The python code has been run with python 3.10 with the packages indicated in the comb_pred_env.yml file found at the top level of this repository.
The required version of python and the dependent packages can be downloaded here: https://www.anaconda.com/distribution/.
Create a new anaconda environment and install from the default channels with conda env create -f comb_pred_env.yml.
Activate the environment with conda activate comb_pred_env
This repository includes a jupyter notebook for reproducing the experimental analysis:
- Documentation for analyzing the cell viability data (Experimental Results).
The source code is stored in the code folder. The required input data is stored in the data folder. The outputs generated from running the code are stored in the output folder.