checked FISHerMan

Db/Mouse.parameters.xml

@@ -90,20 +90,13 @@
   <!-- appendAdapters.m -->
   <adapters>
     <dir1>C:\FISHerMan\Db\Mouse.alladapters.fas</dir1>
-    <key1>ENS\w*T\d*</key1>
 	<gf>GGAATCGTTGCGGGTGTCCT</gf>
 	<grr>CCGCAACATCCAGCATCGTG</grr>
-	<T7r>CCCTATAGTGAGTCGTATTA</T7r>
-	<rRr>AGAGTGAGTAGTAGTGGAGT</rRr>
-	<rGr>GATGATGTAGTAGTAAGGGT</rGr>
-    <rBr>TGTGATGGAAGTTAGAGGGT</rBr>
-	<rIRr>GGAGTAGTTGGTTGTTAGGA</rIRr>
   </adapters>
 
   <!-- 1stPCR parameters -->
   <!-- blast1stPCR.m -->
   <onePCR>
-    <key1>ENS\w*T\d*</key1>
 	<seqNum>1000</seqNum>
 	<thres>22</thres>
 	<querySize>20</querySize>
@@ -116,7 +109,6 @@
   <!-- otherSteps parameters -->
   <!-- blastOtherSteps.m -->
   <otherSteps>
-    <key1>ENS\w*T\d*</key1>
 	<thres>22</thres>
 	<querySize>50</querySize>
     <blastArgs1>-S 2</blastArgs1>
@@ -132,7 +124,6 @@
   <!-- arna parameters -->
   <!-- blastAbundantRNA.m -->
   <arna>
-    <key1>ENS\w*T\d*</key1>
 	<seqNum>1000</seqNum>
 	<thres>30</thres>
 	<querySize>73</querySize>
@@ -144,7 +135,6 @@
   <!-- probeList parameters -->
   <!-- generateProbeList.m -->
   <probeList>
-    <key1>ENS\w*T\d*</key1>
 	<number>48</number>
 	<dir1>C:\FISHerMan\Db\Mouse.STList.fas</dir1>
   </probeList>