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Release version 1.0.0 #227

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merged 33 commits into from
May 6, 2024
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eeb33f5
Pushing develop branch
fontikar Apr 18, 2024
166a51e
Small fixes (#193)
ehwenk Apr 18, 2024
c68dc70
Add testing for functions: standardise_names, strip_names, extract_genus
dfalster Apr 19, 2024
47729b9
Rename testing files to alter order of tests (slow results last)
dfalster Apr 19, 2024
2a8fedb
Activate tests on develop branch
dfalster Apr 19, 2024
24e126e
Refactor load_taxonomic_resources to increase speed (#196)
dfalster Apr 19, 2024
a82ea31
Update doc (#192)
fontikar Apr 22, 2024
3cf5388
108 make output messages optional and reanimate caching
wcornwell Apr 23, 2024
f2e5b38
Standardise names updates (#200)
ehwenk Apr 23, 2024
e4da0ba
Removing hard limit on current downloads and documentation wording im…
wcornwell Apr 26, 2024
c272c2d
Message updates (#201)
ehwenk Apr 28, 2024
acc5eb0
updating github actions
wcornwell Apr 29, 2024
b4b13de
Rename/delete test files
dfalster Apr 29, 2024
0cc6663
Make messages to console optional
dfalster Apr 30, 2024
3d409bc
better family-level matching algorithms (#202)
ehwenk Apr 30, 2024
6b5e46a
Updated pkgdown and fixed error #205 (#206)
fontikar Apr 30, 2024
cd4b3e5
Added skip if github is down (#211)
fontikar Apr 30, 2024
6f630f6
Fuzzy-match: subset accepted list to same first letter (#210)
ehwenk Apr 30, 2024
ad7de34
Allow n_allowed > 1 in fuzzy_match (#213)
ehwenk Apr 30, 2024
06fe708
Identifier string fix (#214)
ehwenk May 1, 2024
a8c7632
Switch adist to stringdist (#216)
ehwenk May 1, 2024
d6f4a6e
Option if fuzzy_match accepted list is empty for a given letter (#218)
ehwenk May 1, 2024
9733c70
Add fuzzy match arguments to `create_taxonomic_update_lookup` (#219)
ehwenk May 1, 2024
9be9776
Apply our faster implementation of word throughout (#220)
dfalster May 1, 2024
e0e9086
removing unused function option and updating readme (#208)
wcornwell May 2, 2024
0ffe4fb
better description of `imprecise_fuzzy_matches` (#221)
ehwenk May 2, 2024
2cd65dc
cleaning up the namespace (#223)
wcornwell May 2, 2024
b785d3e
Remove dependency on forcats
dfalster May 2, 2024
10e909b
Remove use of .data in tidyselect (as deprecated)
dfalster May 2, 2024
1bf0761
Add line breaks (#224)
ehwenk May 3, 2024
96b8267
Update roxygen & websites (#225)
ehwenk May 5, 2024
41b4a78
Prepare for release: Bump version number, update news
dfalster May 6, 2024
809b11c
Fix typo
dfalster May 6, 2024
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Remove dependency on forcats
dfalster committed May 2, 2024

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commit b785d3ec51f62c5db63c657bd81d97902d9b7ccc
1 change: 0 additions & 1 deletion DESCRIPTION
Original file line number Diff line number Diff line change
@@ -18,7 +18,6 @@ Depends:
Imports:
readr,
purrr,
forcats,
dplyr,
stringr,
stringi,
3 changes: 1 addition & 2 deletions R/update_taxonomy.R
Original file line number Diff line number Diff line change
@@ -233,8 +233,7 @@ relevel_taxonomic_status_preferred_order <- function(taxonomic_status) {
"included"
)

forcats::fct_relevel(
taxonomic_status,
factor(taxonomic_status, levels =
subset(
preferred_order,
preferred_order %in% taxonomic_status