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pathogen-surveillance

Here are 2 public repositories matching this topic...

OpenOmics / metavirs

Viral Metagenomics Assembly and Annotation Pipeline

quality-control snakemake pipeline annotation assembly singularity classification viral-metagenomics pathogen-surveillance

Updated Feb 5, 2025
Python

OpenOmics / nanite

A streamlined Oxford Nanopore Viral Metagenomics Pipeline

snakemake pipeline annotation assembly slim singularity classification viral-metagenomics pathogen-surveillance

Updated Jan 29, 2025
Python

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