skip other tests #678

tests/problems/space/test_alignment_problem.py

@@ -74,6 +74,7 @@ def test_prepare_star(self, adata_space_rotate: AnnData, reference: str):
             assert ref == reference
             assert isinstance(ap[prob_key], ap._base_problem_type)
 
+    @pytest.mark.skip(reason="See https://github.com/theislab/moscot/issues/678")
     @pytest.mark.parametrize(
         ("epsilon", "alpha", "rank", "initializer"),
         [(1, 0.9, -1, None), (1, 0.5, 10, "random"), (1, 0.5, 10, "rank2"), (0.1, 0.1, -1, None)],
@@ -86,8 +87,7 @@ def test_solve_balanced(
         rank: int,
         initializer: Optional[Literal["random", "rank2"]],
     ):
-        # check https://github.com/ott-jax/ott/issues/495
-        kwargs = {"inner_iterations": 10}
+        kwargs = {}
         if rank > -1:
             kwargs["initializer"] = initializer
             if initializer == "random":

tests/problems/space/test_mapping_problem.py

@@ -93,6 +93,7 @@ def test_prepare_varnames(self, adata_mapping: AnnData, var_names: Optional[List
             assert prob.x.data_src.shape == (n_obs, x_n_var)
             assert prob.y.data_src.shape == (n_obs, y_n_var)
 
+    @pytest.mark.skip(reason="See https://github.com/theislab/moscot/issues/678")
     @pytest.mark.parametrize(
         ("epsilon", "alpha", "rank", "initializer"),
         [(1e-2, 0.9, -1, None), (2, 0.5, 10, "random"), (2, 0.5, 10, "rank2"), (2, 0.1, -1, None)],
@@ -110,8 +111,7 @@ def test_solve_balanced(
         initializer: Optional[Literal["random", "rank2"]],
     ):
         adataref, adatasp = _adata_spatial_split(adata_mapping)
-        # check https://github.com/ott-jax/ott/issues/495
-        kwargs = {"inner_iterations": 10}
+        kwargs = {}
         if rank > -1:
             kwargs["initializer"] = initializer
             if initializer == "random":