disambiguate

theislab · Nov 15, 2024 · 339d0ba · 339d0ba
1 parent dd676ac
commit 339d0ba
Show file tree

Hide file tree

Showing 3 changed files with 5 additions and 1 deletion.
diff --git a/.Rbuildignore b/.Rbuildignore
@@ -13,3 +13,5 @@
 ^playground/.*$
 ^.*\.kdev4$
 ^\.kdev4/.*$
+^doc$
+^Meta$
diff --git a/.gitignore b/.gitignore
@@ -18,3 +18,5 @@ __pycache__/
 /vignettes/*.R
 /vignettes/*_files/
 /vignettes/.build.timestamp
+/doc/
+/Meta/
diff --git a/vignettes/Gene-Relevance.Rmd b/vignettes/Gene-Relevance.Rmd
@@ -122,7 +122,7 @@ cowplot::plot_grid(plotlist = gms, nrow = 1)
 As you can see, despite the quite different embedding, the rankcor and Cosine diffusion Maps display a number of the same driving genes.
 
 ```{r}
-gms[-1] %>% map(~ .$ids[1:10]) %>% purrr::reduce(intersect) %>% cat(sep = ' ')
+gms[-1] %>% map(~ .$ids[1:10]) %>% purrr::reduce(base::intersect) %>% cat(sep = ' ')
 ```
 
 ```{r}
-Original file line number
+Diff line change
@@ Expand Up / @@ -122,7 +122,7 @@ cowplot::plot_grid(plotlist = gms, nrow = 1) @@
     As you can see, despite the quite different embedding, the rankcor and Cosine diffusion Maps display a number of the same driving genes.
     ```{r}
-    gms[-1] %>% map(~ .$ids[1:10]) %>% purrr::reduce(intersect) %>% cat(sep = ' ')
+    gms[-1] %>% map(~ .$ids[1:10]) %>% purrr::reduce(base::intersect) %>% cat(sep = ' ')
     ```
     ```{r}
@@ Expand Down @@