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Fix sparse matrix cast and ggplot aes_string deprecations #37

Fix sparse matrix cast and ggplot aes_string deprecations

Fix sparse matrix cast and ggplot aes_string deprecations #37

Triggered via pull request December 28, 2023 11:01
Status Failure
Total duration 15m 9s
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check-bioc.yml

on: pull_request
Matrix: build-check
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12 errors and 16 warnings
ubuntu-latest (4.2)
Process completed with exit code 1.
windows-latest (4.2)
--- re-building 'DPT.Rmd' using rmarkdown
windows-latest (4.2)
processing vignette 'Gene-Relevance.Rmd' failed with diagnostics:
windows-latest (4.2)
Vignette re-building failed.
windows-latest (4.2)
Build process failed
windows-latest (4.2)
Process completed with exit code 1.
windows-latest (4.2)
package or namespace load failed for 'AnnotationDbi' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
macOS-latest (4.2)
--- re-building ‘Diffusion-Map-recap.Rmd’ using rmarkdown
macOS-latest (4.2)
processing vignette 'Gene-Relevance.Rmd' failed with diagnostics:
macOS-latest (4.2)
Vignette re-building failed.
macOS-latest (4.2)
Build process failed
macOS-latest (4.2)
Process completed with exit code 1.
ubuntu-latest (4.2)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ubuntu-latest (4.2)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (4.2)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
windows-latest (4.2)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (4.2)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (4.2)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (4.2)
Unused dummy argument ‘itry’ at (1) [-Wunused-dummy-argument]
macOS-latest (4.2)
Unused variable ‘t4’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
Unused variable ‘t5’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
‘i2’ may be used uninitialized in this function [-Wmaybe-uninitialized]
macOS-latest (4.2)
Unused dummy argument ‘a’ at (1) [-Wunused-dummy-argument]
macOS-latest (4.2)
Unused variable ‘i’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
Unused dummy argument ‘idigit’ at (1) [-Wunused-dummy-argument]
macOS-latest (4.2)
Unused dummy argument ‘ifmt’ at (1) [-Wunused-dummy-argument]
macOS-latest (4.2)
Unused variable ‘j’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
Unused variable ‘k1’ declared at (1) [-Wunused-variable]