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update statistics page#39

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hannamlmv wants to merge 104 commits intotforest:maintforest/tseda:mainfrom hannamlmv:statistics_pagehannamlmv/tseda:statistics_pageCopy head branch name to clipboard

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Commits on Nov 14, 2024

• changed pages to vpages in main

  almanilsson

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  75ffef8

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• Updating vpages comment

  almanilsson

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Commits on Nov 15, 2024

• Merge remote-tracking branch 'upstream/main'

  almanilsson

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Commits on Nov 18, 2024

• fix: changed default height of tree

  hannamlmv

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  c386947

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• Merge pull request #38 from hannamlmv/trees_page

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  hannamlmv

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• feat: changed tree position to range

  hannamlmv

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  f2419db

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• fix: update tree size

  hannamlmv

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  8761669

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• fix: non-overlapping intervals

  hannamlmv

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  ccb194d

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• feat: added warning for unvalid inputs

  hannamlmv

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  9844bc1

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• feat: added warning for tree index bounds

  hannamlmv

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  a5a7cae

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• fix: unable to move past highest index

  hannamlmv

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  8b20036

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• chore: formatting

  hannamlmv

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  9e6d0a2

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• fix: long line

  hannamlmv

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• chore: rename variables

  hannamlmv

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• test

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• test2

  hannamlmv

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• chore: formatting

  hannamlmv

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Commits on Nov 19, 2024

• feat: added options to choose to search by position or index

  hannamlmv

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• style: some styling of toggle group

  hannamlmv

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• style: formatting

  hannamlmv

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  7898363

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• fix: variable name error

  hannamlmv

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  1b8f3d4

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• fix: casing error

  hannamlmv

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  532b296

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• chore: reformatting

  hannamlmv

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  7e07ceb

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• fix: put plots in a column

  hannamlmv

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  992f619

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• Fixing gap between map and toolbar, and removing sidebar options

  almanilsson

  committed
  8beeee6

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• feat: made plots resizable

  hannamlmv

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  188bdf8

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• chore: formatting

  hannamlmv

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  36f72d5

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• fixing table alignment

  almanilsson

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  6d473fa

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• making geomap height static to make it more compatible with smaller browser windows

  almanilsson

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  b9c9045

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• Merge pull request #39 from hannamlmv/trees_page

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  hannamlmv

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• Merge pull request #43 from hannamlmv/structure_page

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  hannamlmv

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• reformat maps.py

  almanilsson

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• removing comment " # TODO: Should make it based on what the user is interacting with" regarding the collapsed sidebar option

  almanilsson

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• Changing "toggle" to a multiselect

  almanilsson

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• Multiselect changed to multichoice

  almanilsson

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• remormatting map and datastore

  almanilsson

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Commits on Nov 20, 2024

• fix: page setting functional

  hannamlmv

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• feat: warning when entering existing name

  hannamlmv

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• feat: colors added randomly to new samples

  hannamlmv

  committed
  c8b6b55

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• chore: clean code

  hannamlmv

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  ede415e

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• chore: fix order of imports

  hannamlmv

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  67fc91a

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• chore: formatting

  hannamlmv

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  47ef80e

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• fix: removed dark mode button

  ThereseBjorkman

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  5fb8961

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• chore: reformatted

  ThereseBjorkman

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  819a5eb

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• Merge pull request #48 from hannamlmv/dark_mode

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  ThereseBjorkman

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• fix: resizing of haplotype plot

  hannamlmv

  committed
  5cb108b

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• fix: changed order of sidebar menus

  hannamlmv

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  ef22010

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• modified sample set ID change with better descriptions and an update button

  almanilsson

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  6627974

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• Merge pull request #46 from hannamlmv/sample_sets_page

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  hannamlmv

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• Checking sample selection type validity

  almanilsson

  committed
  cdfe002

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• changed individuals test dues to changes in layout

  almanilsson

  committed
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• change in tests.. they are complaining that "Individuals table options" is not visible despite them being visisble

  almanilsson

  committed
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• reformat datastore

  almanilsson

  committed
  f4ea83d

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• feat: dropdown for sort order

  hannamlmv

  committed
  0bec654

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• adding default pair of selected sample groups to make structure page work (throws error if none selected)

  almanilsson

  committed
  73fb531

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• commented out "Data modification" check in tests due to it not recognising modules that do exist - needs to be updated

  almanilsson

  committed
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• feat: sort order ascending/descending

  hannamlmv

  committed
  aa64073

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• fix: descending order sort

  hannamlmv

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  406bda7

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• chore: reformatting

  hannamlmv

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Commits on Nov 21, 2024

• feat: sorting ascending + descending always

  hannamlmv

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  2acfa1e

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• Merge pull request #49 from hannamlmv/ignn_page

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  hannamlmv

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• Improved filters (though panels bool is a bit broken). Set map height

  almanilsson

  committed
  ae307ba

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• Merge pull request #41 from hannamlmv/individuals_page

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  almanilsson

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• fix: changed sidebar menus to open

  hannamlmv

  committed
  bfd9046

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• fix: added y-axis labels to plots

  hannamlmv

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  14dd395

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• fix: removed window sizing option

  hannamlmv

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  15ed7ce

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• chore: formatting

  hannamlmv

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  3965cd6

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• fix: added warning message when no samples selected

  hannamlmv

  committed
  6446b5e

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• fix: the warning pane had dissapeared from the trees page

  hannamlmv

  committed
  0b29197

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• chore:reformatting

  hannamlmv

  committed
  36d91b6

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• fix: long line

  hannamlmv

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  44170ca

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• fix: shortening line

  hannamlmv

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  8b78928

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• Merge pull request #62 from hannamlmv/trees_page

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  hannamlmv

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• fix: take bake window size

  hannamlmv

  committed
  c6eae50

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• feat: added titles even when warnings are displayed

  hannamlmv

  committed
  704bf6d

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• fix: uncommented tests

  hannamlmv

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  e7820df

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• fix: extended sleep time in tests

  hannamlmv

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• chore: undo some changes

  hannamlmv

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Commits on Nov 22, 2024

• Merge pull request #64 from hannamlmv/tests

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  almanilsson

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• Merge pull request #61 from hannamlmv/structure_page

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  hannamlmv

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  ed85796

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• Merge pull request #59 from hannamlmv/ignn_page

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  hannamlmv

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• fix: added warning for vbar when no samples selected

  hannamlmv

  committed
  6bb6d87

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• feat: added warning for haplotype plot

  hannamlmv

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  286b17e

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• chore:reformatting

  hannamlmv

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  b9446cb

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• Merge pull request #65 from hannamlmv/ignn_page

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  hannamlmv

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Commits on Nov 25, 2024

• fix issues #67, #69 and #70

  almanilsson

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  e90089f

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• update test sleep time

  almanilsson

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• update test sleep time to 20

  almanilsson

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• Merge pull request #71 from hannamlmv/individuals_fix

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  almanilsson

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Commits on Nov 26, 2024

• Merge remote-tracking branch 'upstream/main'

  hannamlmv

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  8e46f3f

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• fix: removed selection of sample sets, only using active sets

  hannamlmv

  committed
  8f8a48b

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• feat: warning pane when no samples selected

  hannamlmv

  committed
  085b483

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• Fix error message when branch mode selected for uncalibrated data

  hannamlmv

  committed
  7d493ea

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• reformat

  hannamlmv

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  7e276dc

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• remove sample select on multiway plot

  hannamlmv

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  bbd11b6

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• test

  hannamlmv

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  436f89d

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• test

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  dc583ac

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• fix error

  hannamlmv

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  f321dab

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• add multichoice for comparisons

  hannamlmv

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  14be67f

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• add functional comparisons menu

  hannamlmv

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  5e47e1d

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• fix order of imports

  hannamlmv

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  b3e5a40

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• remove commented line

  hannamlmv

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• fix graph updates automatically when comparison selection changes

  hannamlmv

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  a141556

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• fix error when no samples chosen

  hannamlmv

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