TARDIS v3.0.dev3396

Changes:

• 145c709 Added Mark Magee (#1027)
• d611b5a Update .mailmap
• 1cb0808 Update .orcid.csv
• 56a04e4 Update .mailmap
• d315f46 Changed orcid order
• 735fac9 Add epassaro orcid (#1024)
• 0e05613 Add A. Floers's orcid
• f4dc1f2 added Alice's orcid (#1022)
• a13084a Update orcids
• c9aca8b Update team.rst

See More

• d2ac48a add orcid contributor information
• 9cef134 Update .mailmap
• adff6db Set cron job, disable CI and PR (#1021)
• 0185768 Set up release TARDIS version with Azure Pipelines (#1015)
• be9c047 Update .mailmap (#1020)
• cc1ddde Updated .mailmap (#1018)
• 2284d9c Pipeline for comparing reference data (#1010)
• 4c4be60 Removed GH Action for release versions (#1016)
• 4635460 Fixed typo (#1013)
• f41f130 Trying to get the right version number for automatic release (#1006)
• 741b18e Improvements for the update_reference section [docs] (#1008)
• 6bb343a Gui fix (#1011)
• 71dad34 Fix for packet source unit test (#1009)
• 4161630 Fix for vboundary tests (#1007)
• ff873fb Checking failing tests on Azure (#995)
• 5c90622 Add YML file for release version (#1005)
• 51b3f59 Fixed csvy abundance indexing bug (#1004)
• 8ae6ae4 added new link to running
• efd57af Update doc-build.yml
• 9de9900 Custom source packets (#1003) [ #1002 ]
• b3b45ad Large cleanup operation (#994)
• df0ed42 Changes made to update_refdata documentation (#992)
• f451b68 log additional properties in hdf witeout when --with-vpacket-logging is present (#967)
• 537ea72 Fixes numpydoc for util (#969)
• 6dc2f0f Fix typo (#985)
• d773288 Fix git clone rendering in installation (#983)
• 36ed619 Pinned numpy to v1.15 (#982)
• 774e69c Update tardis_env3.yml
• 0b947a4 Add further fix to quickstart link (#978)
• a73c464 Add links to Quickstart (#975)
• 873ebd9 Update tardis_env3.yml
• d2de755 Update tardis_env3.yml
• aaff2ce Update tardis_env3.yml
• b4da5cb Update doc-build.yml for Azure Pipelines
• b9b2194 Update tardis_env3.yml
• 00c021d Update doc-build.yml for Azure Pipelines
• e73bc83 Incorporated Credit Policy directly
• 70092a4 Update tardis_env3.yml
• f5b98cb Update doc-build.yml for Azure Pipelines
• 90f9a00 Added Credits
• 76db0d6 Fix formal integral spikes bug (see #970) (#971)
• 7b95ff6 removed the conda update
• 5bd8663 Merge pull request #968 from jamesgillanders/master [ #950 ]
• dbb7987 Fixed GUI #950 tardis/gui/widgets.py
• 1d7870e Isotope time0 (#965)
• 52e4546 fix AtomData repr. (#966)
• 4e5c8ec Raise error if requested atoms are not in the atomic data (#964)
• 8b8c3bc Csvy model config dict (#959)
• 7b8f28b Add issue template (#949)
• a2d1eb7 Update tardis_env3.yml
• 2e8e0bf Update simple_test_framework.yml for Azure Pipelines
• 6f4d2a2 Save integrated spectrum to hdf if requested (#960)
• 86f8644 add atom data downloader
• 2fcea69 add blondin converter (#957)
• e8c6963 Dilution factor fix (#956)
• 676a38c add both toymodels
• 1845183 rename line interaction assumptions
• 93d748e add stuff
• e0ed796 add explanations
• 067751f add blondin compare files
• c63440b add plasma comparison
• eb4cf1b Merge remote-tracking branch 'upstream/master' into docs/ccomparison
• ff39c5e added download link
• 009b589 add code comparison (#953)
• 0d69f67 add code comparison
• 1435ff1 Base schema fix (#952)
• 415d5e4 add apidoc to env file
• edf98ae Merge pull request #951 from wkerzendorf/docs/clean_up
• 18ab9f3 Merge remote-tracking branch 'upstream/master' into docs/clean_up
• cf35dfc add converters
• e0f5a04 Added Model Doc Page (#26)
• 0149d89 large cleanup operation
• 6d35962 move configuration again
• baec4c4 update the development section
• 595aba5 further restructure
• 4101163 move workflow to development
• 7c699d6 large restructure
• 470c081 several changes to the structure
• c9cd958 restructure of documentation
• cee6c0d Update General CI Documentation (#943)
• adde5b0 Merge pull request #936 from marxwillia/csvy_model
• 551d730 Cleaned PR
• 87c9b39 parent 8d90018 [ #940 ]
• 05f6c77 Added csvy_model property to base schema.
• 0a7147f Update self-hossted agent documentaiton (#942)
• 97dfb84 Merge pull request #946 from tardis-sn/PR_trigger
• 88a5685 Update build documentation script
• f7f72ed Merge pull request #945 from tardis-sn/revert-944-PR_trigger
• 3f6dcf3 Revert "Remove PR Trigger"
• 3b30298 Merge pull request #944 from tardis-sn/PR_trigger
• 0a8f219 Remove PR Trigger
• e74ebaf Merge pull request #939 from Youssef15015/docs_deployment
• 6d7b50a Update CI documendation
• 8b7ec6a Deploying docuemntation using Azure
• b2c14e3 Correct index script spelling (#940)
• 153736a Added csvy parser (#928)
• 9af7d7b Radiative recombination (#933)
• 7deee9b Relocated the azure_pipelines.yml into a new directory called pipelines, and renamed it as pipeline_A (#934)
• c23cfb2 Fix for conda-forge package (#930) [ astropy/astropy-helpers#221 ]
• 1bb044f update the team
• 95b565c update the citation and acknowledgement section
• 549adee Density docs (#918)
• 9b2dccd Adding a TARDIS data repo (#926)
• b7d486a add svg image in sensible system
• 19ea00a Migrate beta_sobolev calculation from cython to numba (#924)
• c2a89ce Merge pull request #925 from wkerzendorf/docs/fix_changelog
• 9b7a36e Merge branch 'master' into docs/fix_changelog
• a044c55 add markdown changelog - remove rst changelog
• 0387724 fix the filename for changelog
• 1d0f495 add changelog more prominently. remove old tardis env
• 3f2102f Merge pull request #923 from wkerzendorf/fix_nlte_normalization
• 6ecdd1e Revert "Fix nlte normalization (#920)" (#922)
• fd57afc Fix nlte normalization (#920) [ #784 ]
• de83a13 add changes builder to travis process (#921)
• f801039 Add possibility to bias vpacket emission based on optical depth (#919)
• a415265 add changes builder to travis process
• 221d72d Merge remote-tracking branch 'upstream/master' into fix_nlte_normalization
• f98ef14 make python3 compatible (#914)
• f659779 general overhaul of the docs for 3.0 (#902)
• 96b19c0 Update README.rst
• 32bcf38 make python3 compatible (#916)
• 750fb86 Parsing STELLA files for TARDIS (#915)
• 4f8e8ca Use Russian roulette to kill v-packets with negligible weight (#911)
• 9e398b3 Update fetch_reference_data.sh
• 592cc80 Relativity (#697)
• d209920 disable auto_upgrade for setup_helpers
• cf1178a .nojekyll added to docs (#901)
• e3d3fe6 add pytest azurepipelines (#897)
• 4958e17 Adding general build artefacts (#896)
• 1745c08 Update README.rst
• 908c8c0 Azure pipeline for TARDIS (#894)
• 1127c22 remove git lfs for doctr
• 02c07e6 add doctr to TARDIS (#893)
• 3c190c2 adding azure-pipelines (#892)
• bc98430 adding installation instructions for OpenMP
• 012c694 New template setup from astropy (#891)
• 8f55b1d Set up CI with Azure Pipelines
• 04e60e0 Update installation.rst (#888)
• e61beb6 Pandas ix fix (#886)
• 04b4472 Python3 version of TARDIS (#879) [ #25 ]
• 89270c2 add installation openmp fix to documentation
• 6e71f73 Adds description of gcc problem to documentation (#881)
• fc7465a Update README.rst
• e93283f Update README.rst
• 05cb381 Use interpolated values to do formal integral with more shells (#859)
• 96d6c0c Update tardis_env27.yml
• 3d01a85 Some small fixes related to the documentation and the building process (Fix #842) (#873)
• 0c63953 Add Travis Stages: Activate Integration tests (#868)
• 7648c19 change order of env install
• ef055ce activate tardis before cython
• 916276d Merge branch 'master' of github.com:tardis-sn/tardis into travis_update
• 6e0b58c activate before cython install
• 0e8dafb Add Travis Caching and separate scripts for CI (#866)
• 27732bf update travis yaml
• c9afcb7 remove space after equal
• 8c3a246 update clone refdata
• 7c7a171 remove git lfs from separate install
• ae8b654 add single quotes
• 3d5b444 update refdata path
• 8e66b69 Merge remote-tracking branch 'upstream/master' into travis_update
• 88edc63 update comments from unoebauer
• 8c367dc Unify unittest hdfs (#864)
• 44460c5 update ref_data_home
• 0e6cf07 remove the fetch reference data caching - to be done in next PR
• ebd95a2 ref data avail
• aed3f80 fetch reference data
• d70a893 add refdata to caching
• 076bfbe caching tardis env
• 2f319b1 adding new ci helper
• ef04184 swap coveralls for codecov
• 5c1a8a0 remove cached miniconda
• fd1fe52 add caching
• 75d45ae Adding CodeCov integration (#865)
• dd4023e fix documentation
• 08bbc01 update documentation for generate references
• f6b02f3 add call_back to run_tardis (#860)
• 41d3c8f Thomson cross section: Continuation of PR #688 (#863)
• 22cdfbe Add full test for formal integral method (#850)
• d6a2ac0 Describe refdata update and workflow refactor (#861)
• b432f8a Add capability to store information about the plasma state during iterations (#848)
• e91a7b7 Refactor logging (#857)
• 29f0193 Extend formal integral to line_interaction_type macroatom (#856)
• 4622143 Make the conda-forge channel the only channel (#855)
• 7a86d20 Fix formal integral (#853)
• df2bdf1 Missing refdata (#849)
• 19f14ef add atomic data description (#851)
• da5664a update the text to be correct
• 9d323a4 Revert "change to new cython version"
• 247a442 Revert "add cython version check"
• 09ca41d Revert "remove OSX build for now"
• 2cb9505 Revert "add the cython compile example"
• e7310e6 add the cython compile example
• abc554a remove OSX build for now
• 9f6b73b add cython version check
• b4c862b change to new cython version
• 568dc8c Update Documentation: new location of tardis_example (#845)
• 78aa633 Fix issue with custom_composition reader (#843)
• 8eea19f Remove bbsampling from schema file (#844)
• 2c3ce24 Add json sphinx (#837)
• 96e3e3c Fixed indentation and position of delta_treatment in plasma/standard_plasmas.py (#841)
• 1ee849e fix cython version to specific commit (#838)
• 6e00d66 add plex to requirements
• ae09381 Simplify convergence strategies (#821)
• d546c95 add danger about including a # for the custom abundance
• 1724ff1 remove unnecessary documentation that is now in toctree
• 1baa780 restructure landing page to use notebooks (#833)
• a8e6aa5 Fixes #830 (#832)
• dff362e Fix NLTE Normalization - issue #784 even more gs
• 03c7acd Flip g_ratio in NLTE collision matrix to fit new atomic data - issue #784
• d243f4c Fix NLTE Normalization - issue #784 some more gs
• b54f34b Fix NLTE Normalization - issue #784 g.loc
• 68bd014 Fix NLTE Normalization - issue #784

This list of changes was auto generated.