TARDIS Full Formal Integral Regression Tests

[atharva-2001]

📝 Description

Type: 🚦 testing
Test Files- tardis-sn/tardis-regression-data#20

📌 Resources

Examples, notebooks, and links to useful references.

🚦 Testing

How did you test these changes?

• Testing pipeline
• Other method (describe)
• My changes can't be tested (explain why)

☑️ Checklist

• I requested two reviewers for this pull request
• I updated the documentation according to my changes
• I built the documentation by applying the build_docs label

Note: If you are not allowed to perform any of these actions, ping (@) a contributor.

[tardis-bot]

*beep* *bop*
Hi human,
I ran ruff on the latest commit (1a81691).
Here are the outputs produced.
Results can also be downloaded as artifacts here.
Summarised output:

3	F405  	`deepcopy` may be undefined, or defined from star imports
1	RET505	Unnecessary `else` after `return` statement
1	F403  	`from tardis.tests.fixtures.atom_data import *` used; unable to detect undefined names
1	F821  	Undefined name `pytest_report_header`
1	PGH004	Use specific rule codes when using `noqa`

Complete output(might be large):

tardis/conftest.py:11:1: F403 `from tardis.tests.fixtures.atom_data import *` used; unable to detect undefined names
tardis/conftest.py:29:49: PGH004 Use specific rule codes when using `noqa`
tardis/conftest.py:31:9: F821 Undefined name `pytest_report_header`
tardis/conftest.py:144:5: RET505 Unnecessary `else` after `return` statement
tardis/conftest.py:229:19: F405 `deepcopy` may be undefined, or defined from star imports
tardis/conftest.py:238:19: F405 `deepcopy` may be undefined, or defined from star imports
tardis/conftest.py:267:19: F405 `deepcopy` may be undefined, or defined from star imports
Found 7 errors.

[codecov]

Codecov Report

Attention: Patch coverage is 96.96970% with 1 line in your changes missing coverage. Please review.

Project coverage is 69.73%. Comparing base (5fe6806) to head (1a81691).
Report is 2 commits behind head on master.

Files	Patch %	Lines
tardis/spectrum/base.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##           master    #2805      +/-   ##
==========================================
- Coverage   69.88%   69.73%   -0.15%     
==========================================
  Files         208      208              
  Lines       15453    15462       +9     
==========================================
- Hits        10799    10783      -16     
- Misses       4654     4679      +25     

☔ View full report in Codecov by Sentry.
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[tardis-bot]

*beep* *bop*
Hi human,
I ran benchmarks as you asked comparing master (5fe6806) and the latest commit (1a81691).
Here are the logs produced by ASV.
Results can also be downloaded as artifacts here.

Significantly changed benchmarks:

| Change   | Before [5fe6806d] <master>   | After [1a816915]    |   Ratio | Benchmark (Parameter)                                                                         |
|----------|------------------------------|---------------------|---------|-----------------------------------------------------------------------------------------------|
| -        | 228±0.1ns                    | 205±0.01ns          |     0.9 | spectrum_formal_integral.BenchmarkTransportMontecarloFormalIntegral.time_intensity_black_body |

All benchmarks:

Benchmarks that have improved:

| Change   | Before [5fe6806d] <master>   | After [1a816915]    |   Ratio | Benchmark (Parameter)                                                                         |
|----------|------------------------------|---------------------|---------|-----------------------------------------------------------------------------------------------|
| -        | 228±0.1ns                    | 205±0.01ns          |     0.9 | spectrum_formal_integral.BenchmarkTransportMontecarloFormalIntegral.time_intensity_black_body |

Benchmarks that have stayed the same:

| Change   | Before [5fe6806d] <master>   | After [1a816915]    | Ratio   | Benchmark (Parameter)                                                                                                               |
|----------|------------------------------|---------------------|---------|-------------------------------------------------------------------------------------------------------------------------------------|
|          | 30.3±0.06μs                  | 36.4±2μs            | ~1.20   | transport_montecarlo_packet_trackers.BenchmarkTransportMontecarloPacketTrackers.time_generate_rpacket_tracker_list                  |
|          | 5.85±0.8μs                   | 6.70±1μs            | ~1.15   | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_vpacket                                           |
|          | 47.7±30μs                    | 53.3±30μs           | ~1.12   | transport_montecarlo_interaction.BenchmarkTransportMontecarloInteraction.time_line_scatter                                          |
|          | 3.42±0ms                     | 3.79±0.02ms         | ~1.11   | opacities_opacity_state.BenchmarkOpacitiesOpacityState.time_opacity_state_initialize('macroatom')                                   |
|          | 35.5±10μs                    | 23.7±6μs            | ~0.67   | transport_montecarlo_packet_trackers.BenchmarkTransportMontecarloPacketTrackers.time_generate_rpacket_last_interaction_tracker_list |
|          | 7.22±2μs                     | 7.76±2μs            | 1.07    | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_vpacket_volley                                    |
|          | 2.33±1μs                     | 2.43±2μs            | 1.04    | transport_montecarlo_estimators_radfield_estimator_calcs.BenchmarkMontecarloMontecarloNumbaPacket.time_update_line_estimators       |
|          | 2.53±0.4ms                   | 2.62±0.5ms          | 1.04    | transport_montecarlo_single_packet_loop.BenchmarkTransportMontecarloSinglePacketLoop.time_single_packet_loop                        |
|          | 2.82±0.01ms                  | 2.89±0ms            | 1.03    | opacities_opacity_state.BenchmarkOpacitiesOpacityState.time_opacity_state_initialize('scatter')                                     |
|          | 40.4±0.08s                   | 40.4±0.06s          | 1.00    | run_tardis.BenchmarkRunTardis.time_run_tardis                                                                                       |
|          | 2.08±0m                      | 2.08±0m             | 1.00    | spectrum_formal_integral.BenchmarkTransportMontecarloFormalIntegral.time_FormalIntegrator_functions                                 |
|          | 732±0.6ns                    | 734±0.8ns           | 1.00    | transport_montecarlo_interaction.BenchmarkTransportMontecarloInteraction.time_thomson_scatter                                       |
|          | 1.89±0.01ms                  | 1.86±0.01ms         | 0.99    | transport_montecarlo_main_loop.BenchmarkTransportMontecarloMontecarloMainLoop.time_montecarlo_main_loop                             |
|          | 3.10±0.4μs                   | 3.06±0.7μs          | 0.99    | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_bad_vpacket                                       |
|          | 561±100ns                    | 552±100ns           | 0.98    | opacities_opacity.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation                                |
|          | 571±200ns                    | 561±200ns           | 0.98    | opacities_opacity.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation                              |
|          | 1.08±0m                      | 1.06±0m             | 0.98    | run_tardis.BenchmarkRunTardis.time_run_tardis_rpacket_tracking                                                                      |
|          | 3.46±0.5μs                   | 3.36±0.6μs          | 0.97    | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_vpacket_within_shell                              |
|          | 42.4±20μs                    | 40.7±20μs           | 0.96    | transport_montecarlo_interaction.BenchmarkTransportMontecarloInteraction.time_line_emission                                         |
|          | 66.1±0.04ms                  | 63.6±0.2ms          | 0.96    | transport_montecarlo_packet_trackers.BenchmarkTransportMontecarloPacketTrackers.time_rpacket_trackers_to_dataframe                  |
|          | 1.24±0μs                     | 1.17±0μs            | 0.94    | transport_geometry_calculate_distances.BenchmarkTransportGeometryCalculateDistances.time_calculate_distance_boundary                |
|          | 541±100ns                    | 501±100ns           | 0.93    | opacities_opacity.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation                                      |
|          | 1.55±0.3μs                   | 1.41±0.5μs          | 0.91    | transport_geometry_calculate_distances.BenchmarkTransportGeometryCalculateDistances.time_calculate_distance_line                    |

If you want to see the graph of the results, you can check it here