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2 changes: 1 addition & 1 deletion .buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 02d0d8c5d1f19a7eee70180faa7e74eb
config: c694221f461bf21d19f306d40c3e6e3f
tags: 645f666f9bcd5a90fca523b33c5a78b7
2 changes: 1 addition & 1 deletion _sources/index.rst.txt
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Expand Up @@ -10,7 +10,7 @@ This is the documentation for STARDIS.
Quickstart <quickstart/quickstart>
Downloading and Installation <installation>
Physics of STARDIS <physics/physics_of_stardis>
Example Notebooks <example_notebooks>
Example Notebooks <example_notebooks/rotation_broadening>
Contributing <contributing>
Bibliography <bibliography>

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4 changes: 2 additions & 2 deletions _sources/installation.rst.txt
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Expand Up @@ -25,7 +25,7 @@ the following in the terminal (replacing ``{platform}`` with
$ wget -q https://raw.githubusercontent.com/tardis-sn/tardis/master/conda-{platform}.lock
$ conda create --name stardis --file conda-{platform}.lock
$ conda activate stardis
$ pip install git+https://github.com/tardis-sn/[email protected].12
$ pip install git+https://github.com/tardis-sn/[email protected].25
The third command (``conda activate stardis``) activates the
environment, which is necessary to correctly install STARDIS using the directions below.
Expand All @@ -38,7 +38,7 @@ If you are using Mamba, the steps are similar:
$ wget -q https://raw.githubusercontent.com/tardis-sn/tardis/master/conda-{platform}.lock
$ mamba create --name stardis --file conda-{platform}.lock
$ mamba activate stardis
$ pip install git+https://github.com/tardis-sn/[email protected].12
$ pip install git+https://github.com/tardis-sn/[email protected].25
Downloading and Installing STARDIS
----------------------------------
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2 changes: 1 addition & 1 deletion _static/documentation_options.js
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const DOCUMENTATION_OPTIONS = {
VERSION: '0.1.dev1+ge5d6485',
VERSION: '0.1.dev1+ge84a636',
LANGUAGE: 'en',
COLLAPSE_INDEX: false,
BUILDER: 'html',
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5 changes: 3 additions & 2 deletions bibliography.html
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<meta charset="utf-8" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Bibliography &mdash; stardis 0.1.dev1+ge5d6485 documentation</title>
<title>Bibliography &mdash; stardis 0.1.dev1+ge84a636 documentation</title>
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
<link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
<link rel="stylesheet" href="_static/graphviz.css" type="text/css" />
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<script src="_static/jquery.js?v=5d32c60e"></script>
<script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
<script src="_static/documentation_options.js?v=1749e21c"></script>
<script src="_static/documentation_options.js?v=8f24d363"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=dc90522c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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<li class="toctree-l1"><a class="reference internal" href="quickstart/quickstart.html">Quickstart</a></li>
<li class="toctree-l1"><a class="reference internal" href="installation.html">Downloading and Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="physics/physics_of_stardis.html">Physics of STARDIS</a></li>
<li class="toctree-l1"><a class="reference internal" href="example_notebooks/rotation_broadening.html">Example Notebooks</a></li>
<li class="toctree-l1"><a class="reference internal" href="contributing.html">Contributing</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">Bibliography</a></li>
</ul>
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9 changes: 5 additions & 4 deletions contributing.html
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<meta charset="utf-8" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Contributing &mdash; stardis 0.1.dev1+ge5d6485 documentation</title>
<title>Contributing &mdash; stardis 0.1.dev1+ge84a636 documentation</title>
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
<link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
<link rel="stylesheet" href="_static/graphviz.css" type="text/css" />
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<script src="_static/jquery.js?v=5d32c60e"></script>
<script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
<script src="_static/documentation_options.js?v=1749e21c"></script>
<script src="_static/documentation_options.js?v=8f24d363"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=dc90522c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
<link rel="next" title="Bibliography" href="bibliography.html" />
<link rel="prev" title="Physics of STARDIS" href="physics/physics_of_stardis.html" />
<link rel="prev" title="STARDIS" href="example_notebooks/rotation_broadening.html" />
</head>

<body class="wy-body-for-nav">
Expand All @@ -51,6 +51,7 @@
<li class="toctree-l1"><a class="reference internal" href="quickstart/quickstart.html">Quickstart</a></li>
<li class="toctree-l1"><a class="reference internal" href="installation.html">Downloading and Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="physics/physics_of_stardis.html">Physics of STARDIS</a></li>
<li class="toctree-l1"><a class="reference internal" href="example_notebooks/rotation_broadening.html">Example Notebooks</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">Contributing</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#generating-conda-lockfiles">Generating Conda Lockfiles</a><ul>
<li class="toctree-l3"><a class="reference internal" href="#without-cuda-support">Without CUDA Support</a></li>
Expand Down Expand Up @@ -146,7 +147,7 @@ <h3>With CUDA Support<a class="headerlink" href="#with-cuda-support" title="Link
</div>
</div>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="physics/physics_of_stardis.html" class="btn btn-neutral float-left" title="Physics of STARDIS" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="example_notebooks/rotation_broadening.html" class="btn btn-neutral float-left" title="STARDIS" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="bibliography.html" class="btn btn-neutral float-right" title="Bibliography" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
</div>

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24 changes: 19 additions & 5 deletions example_notebooks/rotation_broadening.html
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<meta charset="utf-8" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>STARDIS &mdash; stardis 0.1.dev1+ge5d6485 documentation</title>
<title>STARDIS &mdash; stardis 0.1.dev1+ge84a636 documentation</title>
<link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
<link rel="stylesheet" href="../_static/css/theme.css" type="text/css" />
<link rel="stylesheet" href="../_static/graphviz.css" type="text/css" />
Expand All @@ -16,7 +16,7 @@

<script src="../_static/jquery.js?v=5d32c60e"></script>
<script src="../_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
<script src="../_static/documentation_options.js?v=1749e21c"></script>
<script src="../_static/documentation_options.js?v=8f24d363"></script>
<script src="../_static/doctools.js?v=888ff710"></script>
<script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
Expand All @@ -25,7 +25,9 @@
<script defer="defer" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
<script src="../_static/js/theme.js"></script>
<link rel="index" title="Index" href="../genindex.html" />
<link rel="search" title="Search" href="../search.html" />
<link rel="search" title="Search" href="../search.html" />
<link rel="next" title="Contributing" href="../contributing.html" />
<link rel="prev" title="Physics of STARDIS" href="../physics/physics_of_stardis.html" />
</head>

<body class="wy-body-for-nav">
Expand All @@ -48,10 +50,19 @@
</div>
</div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
<p class="caption" role="heading"><span class="caption-text">Contents:</span></p>
<ul>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="../quickstart/quickstart.html">Quickstart</a></li>
<li class="toctree-l1"><a class="reference internal" href="../installation.html">Downloading and Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="../physics/physics_of_stardis.html">Physics of STARDIS</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">Example Notebooks</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#Import-Necessary-Code">Import Necessary Code</a></li>
<li class="toctree-l2"><a class="reference internal" href="#Download-Atomic-Data">Download Atomic Data</a><ul>
<li class="toctree-l3"><a class="reference internal" href="#STARDIS-contains-a-post-simulation-function-to-broaden-the-spectrum-appropriate-for-a-v-sin(i)-given-by-the-user.-However,-this-is-only-physically-valid-when-the-spectrum-broadened-is-given-over-a-small-range-of-frequencies-or-wavelengths,-or-is-constant-in-velocity-resolution-across-the-spectrum.">STARDIS contains a post-simulation function to broaden the spectrum appropriate for a v sin(i) given by the user. However, this is only physically valid when the spectrum broadened is given over a small range of frequencies or wavelengths, or is constant in velocity resolution across the spectrum.</a></li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="#Plot-spectra">Plot spectra</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../contributing.html">Contributing</a></li>
<li class="toctree-l1"><a class="reference internal" href="../bibliography.html">Bibliography</a></li>
</ul>
Expand Down Expand Up @@ -237,7 +248,10 @@ <h2>Plot spectra<a class="headerlink" href="#Plot-spectra" title="Link to this h

</div>
</div>
<footer>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="../physics/physics_of_stardis.html" class="btn btn-neutral float-left" title="Physics of STARDIS" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="../contributing.html" class="btn btn-neutral float-right" title="Contributing" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
</div>

<hr/>

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5 changes: 3 additions & 2 deletions genindex.html
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<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Index &mdash; stardis 0.1.dev1+ge5d6485 documentation</title>
<title>Index &mdash; stardis 0.1.dev1+ge84a636 documentation</title>
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
<link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
<link rel="stylesheet" href="_static/graphviz.css" type="text/css" />
Expand All @@ -14,7 +14,7 @@

<script src="_static/jquery.js?v=5d32c60e"></script>
<script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
<script src="_static/documentation_options.js?v=1749e21c"></script>
<script src="_static/documentation_options.js?v=8f24d363"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=dc90522c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
Expand Down Expand Up @@ -48,6 +48,7 @@
<li class="toctree-l1"><a class="reference internal" href="quickstart/quickstart.html">Quickstart</a></li>
<li class="toctree-l1"><a class="reference internal" href="installation.html">Downloading and Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="physics/physics_of_stardis.html">Physics of STARDIS</a></li>
<li class="toctree-l1"><a class="reference internal" href="example_notebooks/rotation_broadening.html">Example Notebooks</a></li>
<li class="toctree-l1"><a class="reference internal" href="contributing.html">Contributing</a></li>
<li class="toctree-l1"><a class="reference internal" href="bibliography.html">Bibliography</a></li>
</ul>
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11 changes: 9 additions & 2 deletions index.html
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<meta charset="utf-8" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>STARDIS Documentation &mdash; stardis 0.1.dev1+ge5d6485 documentation</title>
<title>STARDIS Documentation &mdash; stardis 0.1.dev1+ge84a636 documentation</title>
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
<link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
<link rel="stylesheet" href="_static/graphviz.css" type="text/css" />
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<script src="_static/jquery.js?v=5d32c60e"></script>
<script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
<script src="_static/documentation_options.js?v=1749e21c"></script>
<script src="_static/documentation_options.js?v=8f24d363"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=dc90522c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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<li class="toctree-l1"><a class="reference internal" href="quickstart/quickstart.html">Quickstart</a></li>
<li class="toctree-l1"><a class="reference internal" href="installation.html">Downloading and Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="physics/physics_of_stardis.html">Physics of STARDIS</a></li>
<li class="toctree-l1"><a class="reference internal" href="example_notebooks/rotation_broadening.html">Example Notebooks</a></li>
<li class="toctree-l1"><a class="reference internal" href="contributing.html">Contributing</a></li>
<li class="toctree-l1"><a class="reference internal" href="bibliography.html">Bibliography</a></li>
</ul>
Expand Down Expand Up @@ -104,6 +105,12 @@ <h1>STARDIS Documentation<a class="headerlink" href="#stardis-documentation" tit
<li class="toctree-l2"><a class="reference internal" href="physics/physics_of_stardis.html#transport">Transport</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="example_notebooks/rotation_broadening.html">Example Notebooks</a><ul>
<li class="toctree-l2"><a class="reference internal" href="example_notebooks/rotation_broadening.html#Import-Necessary-Code">Import Necessary Code</a></li>
<li class="toctree-l2"><a class="reference internal" href="example_notebooks/rotation_broadening.html#Download-Atomic-Data">Download Atomic Data</a></li>
<li class="toctree-l2"><a class="reference internal" href="example_notebooks/rotation_broadening.html#Plot-spectra">Plot spectra</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="contributing.html">Contributing</a><ul>
<li class="toctree-l2"><a class="reference internal" href="contributing.html#generating-conda-lockfiles">Generating Conda Lockfiles</a></li>
</ul>
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