Lock Files for Carsus (#392)

* Lock files

* use lock files in tests workflow

* test commit

* Add environment name

* test update ionisation data pull request

* Use setup micromamba

* [build docs]

* Download tardis main repo for refdata

.github/workflows/bridge.yml

@@ -60,14 +60,13 @@ jobs:
             tar -zxf /tmp/atomic.tar.gz -C /tmp
         if: steps.cmfgen-cache.outputs.cache-hit != 'true'
 
-      - name: Setup carsus environment
-        uses: conda-incubator/setup-miniconda@v2
+      - uses: mamba-org/setup-micromamba@v1
         with:
-            miniforge-variant: Mambaforge
-            miniforge-version: latest
-            environment-file: carsus/carsus_env3.yml
-            activate-environment: carsus
-            use-mamba: true
+          environment-file: conda-lock.yml
+          init-shell: bash
+          cache-environment: true
+          cache-downloads: true 
+          environment-name: carsus
 
       - name: Install package
         run: pip install -e carsus/

.github/workflows/carsus-data-repos-config.yml

@@ -50,14 +50,13 @@ jobs:
             fi
           done
 
-      - name: Setup carsus environment
-        uses: conda-incubator/setup-miniconda@v2
+      - uses: mamba-org/setup-micromamba@v1
         with:
-            miniforge-variant: Mambaforge
-            miniforge-version: latest
-            environment-file: carsus/carsus_env3.yml
-            activate-environment: carsus
-            use-mamba: true
+          environment-file: conda-lock.yml
+          init-shell: bash
+          cache-environment: true
+          cache-downloads: true 
+          environment-name: carsus
 
       - name: Install package
         run: pip install -e carsus/

.github/workflows/docs-build.yml

@@ -77,14 +77,13 @@ jobs:
             tar -zxf /tmp/atomic.tar.gz -C /tmp
         if: steps.cmfgen-cache.outputs.cache-hit != 'true'
 
-      - name: Setup environment
-        uses: conda-incubator/setup-miniconda@v2
+      - uses: mamba-org/setup-micromamba@v1
         with:
-            miniforge-variant: Mambaforge
-            miniforge-version: latest
-            environment-file: carsus_env3.yml
-            activate-environment: carsus
-            use-mamba: true
+          environment-file: conda-lock.yml
+          init-shell: bash
+          cache-environment: true
+          cache-downloads: true 
+          environment-name: carsus
 
       - name: Install package
         shell: bash -l {0}

.github/workflows/tests.yml

@@ -63,7 +63,7 @@ jobs:
           git lfs pull --include="test_databases/test.db"
 
       - name: Clone tardis-sn/carsus-refdata
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4
         with:
           repository: tardis-sn/carsus-refdata
           path: carsus-refdata
@@ -93,15 +93,14 @@ jobs:
             wget -q -U "Mozilla/4.0" ${{ env.CMFGEN_DL_URL }}/${{ env.CMFGEN_DB_VER }} -O /tmp/atomic.tar.gz
             tar -zxf /tmp/atomic.tar.gz -C /tmp
         if: steps.cmfgen-cache.outputs.cache-hit != 'true'
-
-      - name: Setup environment
-        uses: conda-incubator/setup-miniconda@v2
+
+      - uses: mamba-org/setup-micromamba@v1
         with:
-            miniforge-variant: Mambaforge
-            miniforge-version: latest
-            environment-file: carsus_env3.yml
-            activate-environment: carsus
-            use-mamba: true
+          environment-file: conda-lock.yml
+          init-shell: bash
+          cache-environment: true
+          cache-downloads: true 
+          environment-name: carsus
 
       - name: Install package
         run: pip install -e .