Fix SBML master file-finding algorithm.

(And clean up comments)
sys-bio · Jun 3, 2024 · 310a1ee · 310a1ee
1 parent 39ce9e7
commit 310a1ee
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/make_algorithms_generic.py b/make_algorithms_generic.py
@@ -15,11 +15,11 @@ def make_algorithms_generic(doc):
             alg_term = Kisao.get_term(kid)
             alts = kisao.utils.get_substitutable_algorithms(alg_term)
             if generic_ode in alts:
-                alg.setKisaoID(694) #'ODE solver'
+                alg.setKisaoID(694)
                 alg.setName("ODE solver")
                 changed = True
             elif generic_ss in alts:
-                alg.setKisaoID(407) #'ODE solver'
+                alg.setKisaoID(407)
                 alg.setName("Steady state root-finding method")
                 changed = True
     return changed

diff --git a/rename_sbml_files.py b/rename_sbml_files.py
@@ -60,4 +60,4 @@ def run(id, sbml_filenames, sbml_master):
     if ":" in sbml_master:
         sbml_master = sbml_master.replace(":", "_")
 
-    return sbml_master
+    return os.path.basename(sbml_master)