GitHub - sylvinite/TACA: Tool for the Automation of Cleanup and Analyses

Tool for the Automation of Cleanup and Analyses

This package contains several tools for projects and data management in the National Genomics Infrastructure in Stockholm, Sweden.

You can setup a demo/development environment using [Vagrant][vagrant] provisioned by [Ansible][ansible].

$ ansible-galaxy install robinandeer.miniconda
$ vagrant up && vagrant ssh

# [inside virtual machince]
$ bash /vagrant/provisioning/run-me.sh

For a more detailed documentation please go to the documentation page.

Name	Name	Last commit message	Last commit date
Latest commit sylvinite Fixed typo in output log Mar 16, 2017 3db5c7b · Mar 16, 2017 History 856 Commits
artwork	artwork	match up complementary bases in logo, fix NationalGenomicsInfrastruct…	Apr 29, 2015
doc	doc	removed deliver submodule and references to it	May 20, 2015
provisioning	provisioning	install package before dev dependencies (dependency links)	Apr 20, 2015
taca	taca	Fixed typo in output log	Mar 16, 2017
tests	tests	Making the unit-tests compatible with travis	Feb 29, 2016
.gitignore	.gitignore	resolving conflicts with master SciLIfeLab	Sep 15, 2015
.travis.yml	.travis.yml	Add required options	Jun 12, 2015
CONTRIBUTING.md	CONTRIBUTING.md	taca no longer assuming FC id will end with XX, version update, corre…	Jul 1, 2016
LICENSE	LICENSE	No copyright!	Sep 17, 2014
MANIFEST.in	MANIFEST.in	MANIFEST file for pypi	Feb 27, 2015
README.md	README.md	match up complementary bases in logo, fix NationalGenomicsInfrastruct…	Apr 29, 2015
Vagrantfile	Vagrantfile	add vagrant provisioned by ansible	Apr 20, 2015
clean.sh	clean.sh	Add clean script	Dec 8, 2014
dependency_links.txt	dependency_links.txt	point to sll instead of me	May 28, 2015
requirements-dev.txt	requirements-dev.txt	removed deliver submodule and references to it	May 20, 2015
requirements.txt	requirements.txt	Change back requirements.txt	Sep 16, 2016
setup.py	setup.py	compilation of project list	Oct 14, 2016