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slideToolKitTest

Sander W. van der Laan edited this page Jan 3, 2024 · 6 revisions

sllideToolKitTest.py is designed to provide a basic test whether or not slideToolKit was properly installed. In 95% of the cases when the output of this script is correct, slideToolKit and CellProfiler are functional and our workflow should work. It specifically tests the installation of a few very critical python3 packages.

Example usage:

python slideToolKitTest.py --bdate 1983-05-13

Argument(s):

  • -b,--bdate Your birthdate in the format YYYY-MM-DD. For instance: 1983-05-13. Required.

Optional argument(s):

  • -v, --verbose Will get all available image properties. Default: False. Optional.
  • -h, --help Provides the help menu. Optional.
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