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Use WESkit to execute Nextflow and Snakemake workflows.

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WESkit workshop

In the first part of the workshop, we are going to use a SimpleVM to compose a Snakemake workflow and execute it locally. In the second part of the workshop, we are going to use the open-source software WESkit that helps researchers to execute Nextflow and Snakemake workflows locally or remote (HPC).

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Use WESkit to execute Nextflow and Snakemake workflows.

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  • Python 95.8%
  • Shell 4.2%